about
The FRIABLE1 gene product affects cell adhesion in ArabidopsisCrystal structure and functional characterization of a glucosamine-6-phosphate N-acetyltransferase from Arabidopsis thalianaThe NGS WikiBook: a dynamic collaborative online training effort with long-term sustainabilityStarting to gel: how Arabidopsis seed coat epidermal cells produce specialized secondary cell wallsThe SEQanswers wiki: a wiki database of tools for high-throughput sequencing analysisTrimmomatic: a flexible trimmer for Illumina sequence dataStreptomyces thermoautotrophicus does not fix nitrogenCSB.DB: a comprehensive systems-biology database.GMD@CSB.DB: the Golm Metabolome Database.De novo sequencing and analysis of the lily pollen transcriptome: an open access data source for an orphan plant species.Reverse engineering: a key component of systems biology to unravel global abiotic stress cross-talk.Mercator: a fast and simple web server for genome scale functional annotation of plant sequence data.Quantitative RT-PCR Platform to Measure Transcript Levels of C and N Metabolism-Related Genes in Durum Wheat: Transcript Profiles in Elevated [CO2] and High Temperature at Different Levels of N Supply.Conversion of MapMan to allow the analysis of transcript data from Solanaceous species: effects of genetic and environmental alterations in energy metabolism in the leaf.Rapid structural phenotyping of plant cell wall mutants by enzymatic oligosaccharide fingerprinting.Measures for interoperability of phenotypic data: minimum information requirements and formattingPageMan: an interactive ontology tool to generate, display, and annotate overview graphs for profiling experiments.Correlation-maximizing surrogate gene space for visual mining of gene expression patterns in developing barley endosperm tissue.Analysis of expressed sequence tags from Actinidia: applications of a cross species EST database for gene discovery in the areas of flavor, health, color and ripening.A guide to using MapMan to visualize and compare Omics data in plants: a case study in the crop species, Maize.Gene expression profiling in susceptible interaction of grapevine with its fungal pathogen Eutypa lata: extending MapMan ontology for grapevine.Robin: an intuitive wizard application for R-based expression microarray quality assessment and analysis.Tomato facultative parthenocarpy results from SlAGAMOUS-LIKE 6 loss of functionOn the current status of Phakopsora pachyrhizi genome sequencing.SLocX: Predicting Subcellular Localization of Arabidopsis Proteins Leveraging Gene Expression Data.GabiPD - The GABI Primary Database integrates plant proteomic data with gene-centric informationTowards positional isolation of three quantitative trait loci conferring resistance to powdery mildew in two Spanish barley landraces.Transcriptome sequencing and microarray design for functional genomics in the extremophile Arabidopsis relative Thellungiella salsuginea (Eutrema salsugineum).Cell wall modification in tobacco by differential targeting of recombinant endoglucanase from Trichoderma reesei.Towards recommendations for metadata and data handling in plant phenotyping.The plant growth promoting substance, lumichrome, mimics starch, and ethylene-associated symbiotic responses in lotus and tomato roots.Adaptation of the MapMan ontology to biotic stress responses: application in solanaceous species.RobiNA: a user-friendly, integrated software solution for RNA-Seq-based transcriptomicsExtension of the visualization tool MapMan to allow statistical analysis of arrays, display of corresponding genes, and comparison with known responses.High precision genome sequencing of engineered Gluconobacter oxydans 621H by combining long nanopore and short accurate Illumina reads.Comparative transcriptomics reveals patterns of selection in domesticated and wild tomatoStarch as a major integrator in the regulation of plant growthXeml Lab: a tool that supports the design of experiments at a graphical interface and generates computer-readable metadata files, which capture information about genotypes, growth conditions, environmental perturbations and sampling strategy.Ribosome and transcript copy numbers, polysome occupancy and enzyme dynamics in Arabidopsis.Co-expression tools for plant biology: opportunities for hypothesis generation and caveats.
P50
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P50
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Björn Usadel
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Björn Usadel
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