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Bioinformatics analysis suggests base modifications of tRNAs and miRNAs in Arabidopsis thalianaRARGE: a large-scale database of RIKEN Arabidopsis resources ranging from transcriptome to phenomeEmpirical analysis of transcriptional activity in the Arabidopsis genomeA flexible representation of omic knowledge for thorough analysis of microarray data.[Arabidopsis functional genomics using full-length cDNAs].RAS1, a quantitative trait locus for salt tolerance and ABA sensitivity in Arabidopsis.CDK9 inhibitor FIT-039 prevents replication of multiple DNA viruses.A promoter-level mammalian expression atlasRectifier of aberrant mRNA splicing recovers tRNA modification in familial dysautonomiaRIKEN Arabidopsis full-length (RAFL) cDNA and its applications for expression profiling under abiotic stress conditions.Deciphering targeting rules of splicing modulator compounds: case of TG003.Positional correlation analysis improves reconstruction of full-length transcripts and alternative isoforms from noisy array signals or short reads.Retinoid derivative Tp80 exhibits anti-hepatitis C virus activity through restoration of GI-GPx expression.Small open reading frames associated with morphogenesis are hidden in plant genomes.Analysis of multiple occurrences of alternative splicing events in Arabidopsis thaliana using novel sequenced full-length cDNAsPosMed-plus: an intelligent search engine that inferentially integrates cross-species information resources for molecular breeding of plantsROS3 is an RNA-binding protein required for DNA demethylation in Arabidopsis.The Arabidopsis NFYA5 transcription factor is regulated transcriptionally and posttranscriptionally to promote drought resistance.RARGE II: an integrated phenotype database of Arabidopsis mutant traits using a controlled vocabulary.Novel Stress-Inducible Antisense RNAs of Protein-Coding Loci Are Synthesized by RNA-Dependent RNA Polymerase.Survey of conserved alternative splicing events of mRNAs encoding SR proteins in land plants.Sm-Like Protein-Mediated RNA Metabolism Is Required for Heat Stress Tolerance in Arabidopsis.Monitoring expression profiles of Arabidopsis gene expression during rehydration process after dehydration using ca 7000 full-length cDNA microarray.Next-generation sequencing-based analysis of reverse transcriptase fidelity.Genome-wide analysis of alternative pre-mRNA splicing in Arabidopsis thaliana based on full-length cDNA sequences.Assessing the monophyly of chlorophyll-c containing plastids by multi-gene phylogenies under the unlinked model conditions.RARTF: database and tools for complete sets of Arabidopsis transcription factors.Synthetic ligand promotes gene expression by affecting GC sequence in promoter.Het-PDB Navi.: a database for protein-small molecule interactions.DNA hypermethyation and silencing of PITX1 correlated with advanced stage and poor postoperative prognosis of esophageal squamous cell carcinoma.Loss of Sfpq Causes Long-Gene Transcriptopathy in the Brain.Loss of Arabidopsis 5'-3' Exoribonuclease AtXRN4 Function Enhances Heat Stress Tolerance of Plants Subjected to Severe Heat Stress.SINC-seq: correlation of transient gene expressions between nucleus and cytoplasm reflects single-cell physiology.Integrative network analysis reveals biological pathways associated with Williams syndromeAccurate fidelity analysis of the reverse transcriptase by a modified next-generation sequencingLoss of RNA-Binding Protein Sfpq Causes Long-Gene Transcriptopathy in Skeletal Muscle and Severe Muscle Mass Reduction with Metabolic MyopathyAlternative splicing at NAGNAG acceptor sites shares common properties in land plants and mammalsMonitoring expression profiles of Arabidopsis genes during cold acclimation and deacclimation using DNA microarraysSynaptic N6-methyladenosine (m6A) epitranscriptome reveals functional partitioning of localized transcripts
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