Survey of Simple Sequence Repeats in Completed Fungal Genomes
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Simple sequence repeats provide a substrate for phenotypic variation in the Neurospora crassa circadian clockComparative genomics and molecular dynamics of DNA repeats in eukaryotesInSatDb: a microsatellite database of fully sequenced insect genomesCryptococcus gattii infectionsDe novo transcriptome sequence assembly and identification of AP2/ERF transcription factor related to abiotic stress in parsley (Petroselinum crispum)Genome-Wide Estimates of Mutation Rates and Spectrum in Schizosaccharomyces pombe Indicate CpG Sites are Highly Mutagenic Despite the Absence of DNA MethylationGenome-wide survey and analysis of microsatellites in giant panda (Ailuropoda melanoleuca), with a focus on the applications of a novel microsatellite marker systemThe genome of the anaerobic fungus Orpinomyces sp. strain C1A reveals the unique evolutionary history of a remarkable plant biomass degraderCoevolution between simple sequence repeats (SSRs) and virus genome sizeUse of genome sequence data in the design and testing of SSR markers for Phytophthora species.Survey and analysis of microsatellites from transcript sequences in Phytophthora species: frequency, distribution, and potential as markers for the genus.Microsatellite flanking region similarities among different loci within insect species.EuMicroSatdb: a database for microsatellites in the sequenced genomes of eukaryotes.Mononucleotide repeats are asymmetrically distributed in fungal genesDetecting microsatellites in genome data: variance in definitions and bioinformatic approaches cause systematic biasGenome-wide analysis of tandem repeats in Daphnia pulex--a comparative approach.Schizosaccharomyces pombe MutSα and MutLα Maintain Stability of Tetra-Nucleotide Repeats and Msh3 of Hepta-Nucleotide Repeats.Genome-wide survey and analysis of microsatellites in nematodes, with a focus on the plant-parasitic species Meloidogyne incognita.Draft whole genome sequence of groundnut stem rot fungus Athelia rolfsii revealing genetic architect of its pathogenicity and virulenceGenetic architecture of a reinforced, postmating, reproductive isolation barrier between Neurospora species indicates evolution via natural selection.Microsatellite marker analysis as a typing system for Candida glabrata.Fast and cost-effective mining of microsatellite markers using NGS technology: an example of a Korean water deer Hydropotes inermis argyropus.Comparative Analysis of the Korean Population of Magnaporthe oryzae by Multilocus Microsatellite Typing.Breakdown of phylogenetic signal: a survey of microsatellite densities in 454 shotgun sequences from 154 non model eukaryote speciesDetection of Mycosphaerella graminicola in wheat leaves by a microsatellite dinucleotide specific-primerDevelopment and characterization of simple sequence repeats for Bipolaris sorokiniana and cross transferability to related species.In- silico exploration of thirty alphavirus genomes for analysis of the simple sequence repeats.Cryptococcosis Serotypes Impact Outcome and Provide Evidence of Cryptococcus neoformans Speciation.Genome-Wide Analysis of Simple Sequence Repeats and Efficient Development of Polymorphic SSR Markers Based on Whole Genome Re-Sequencing of Multiple Isolates of the Wheat Stripe Rust FungusGenome-Wide Survey and Analysis of Microsatellite Sequences in Bovid Species.The Genetic Structure of Phellinus noxius and Dissemination Pattern of Brown Root Rot Disease in TaiwanCharacterization of novel di-, tri-, and tetranucleotide microsatellite primers suitable for genotyping various plant pathogenic fungi with special emphasis on Fusaria and Mycospherella graminicola.Development of Microsatellite Markers and Analysis of Genetic Diversity and Population Structure of Colletotrichum gloeosporioides from EthiopiaDe novo genome assembly and annotation of rice sheath rot fungus Sarocladium oryzae reveals genes involved in Helvolic acid and Cerulenin biosynthesis pathwaysIn silico search, characterization and validation of new EST-SSR markers in the genus Prunus.De novo transcriptome analysis and microsatellite marker development for population genetic study of a serious insect pest, Rhopalosiphum padi (L.) (Hemiptera: Aphididae).Selection processes in simple sequence repeats suggest a correlation with their genomic location: insights from a fungal model system.Microsatellite repeat dynamics in mitochondrial genomes of phytopathogenic fungi: frequency and distribution in the genic and intergenic regions.Draft genome sequencing and secretome analysis of fungal phytopathogen Ascochyta rabiei provides insight into the necrotrophic effector repertoire.Genome-wide In Silico Analysis, Characterization and Identification of Microsatellites in Spodoptera littoralis Multiple nucleopolyhedrovirus (SpliMNPV).
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Survey of Simple Sequence Repeats in Completed Fungal Genomes
description
im November 2004 veröffentlichter wissenschaftlicher Artikel
@de
scientific article published on 24 November 2004
@en
wetenschappelijk artikel
@nl
наукова стаття, опублікована в листопаді 2004
@uk
name
Survey of Simple Sequence Repeats in Completed Fungal Genomes
@en
Survey of Simple Sequence Repeats in Completed Fungal Genomes
@nl
type
label
Survey of Simple Sequence Repeats in Completed Fungal Genomes
@en
Survey of Simple Sequence Repeats in Completed Fungal Genomes
@nl
prefLabel
Survey of Simple Sequence Repeats in Completed Fungal Genomes
@en
Survey of Simple Sequence Repeats in Completed Fungal Genomes
@nl
P2860
P356
P1476
Survey of simple sequence repeats in completed fungal genomes
@en
P2093
Haydar Karaoglu
P2860
P304
P356
10.1093/MOLBEV/MSI057
P577
2004-11-24T00:00:00Z