Rapid and precise alignment of raw reads against redundant databases with KMA

about

Rapid and precise alignment of raw reads against redundant databases with KMA

Item

http://www.wikidata.org/entity/Q58694860

description

im August 2018 veröffentlichter wissenschaftlicher Artikel

@de

scientific article published on 29 August 2018

@en

wetenschappelijk artikel

@nl

наукова стаття, опублікована в серпні 2018

@uk

name

Rapid and precise alignment of raw reads against redundant databases with KMA

@en

Rapid and precise alignment of raw reads against redundant databases with KMA

@nl

type

Item

label

Rapid and precise alignment of raw reads against redundant databases with KMA

@en

Rapid and precise alignment of raw reads against redundant databases with KMA

@nl

prefLabel

Rapid and precise alignment of raw reads against redundant databases with KMA

@en

Rapid and precise alignment of raw reads against redundant databases with KMA

@nl

P1476

Rapid and precise alignment of raw reads against redundant databases with KMA

@en

P2093

Philip T L C Clausen

http://www.w3.org/2001/XMLSchema#string

P2860

A general method applicable to the search for similarities in the amino acid sequence of two proteins

Fast gapped-read alignment with Bowtie 2

The Sequence Alignment/Map format and SAMtools

Cd-hit: a fast program for clustering and comparing large sets of protein or nucleotide sequences

BEDTools: a flexible suite of utilities for comparing genomic features.

MGmapper: Reference based mapping and taxonomy annotation of metagenomics sequence reads

Genotyping using whole-genome sequencing is a realistic alternative to surveillance based on phenotypic antimicrobial susceptibility testing.

SRST2: Rapid genomic surveillance for public health and hospital microbiology labs.

A survey of sequence alignment algorithms for next-generation sequencing.

Solving the problem of comparing whole bacterial genomes across different sequencing platforms.

P2888

s12859-018-2336-6

P304

307

http://www.w3.org/2001/XMLSchema#string

P31

scholarly article

P356

10.1186/S12859-018-2336-6

http://www.w3.org/2001/XMLSchema#string

P407

English

P433

http://www.w3.org/2001/XMLSchema#string

P478

http://www.w3.org/2001/XMLSchema#string

P50

Ole Lund

Frank Møller Aarestrup

Philip T L C Clausen

P577

2018-08-29T00:00:00Z

http://www.w3.org/2001/XMLSchema#dateTime

P6179

1106407461

http://www.w3.org/2001/XMLSchema#string

P698

30157759

http://www.w3.org/2001/XMLSchema#string

P921

applied mathematics

molecular biology

structural biology

P932

6116485

http://www.w3.org/2001/XMLSchema#string