about
The InterPro protein families database: the classification resource after 15 yearsInterPro in 2011: new developments in the family and domain prediction databaseInterPro: the integrative protein signature databasePANTHER version 6: protein sequence and function evolution data with expanded representation of biological pathwaysPANTHER: a browsable database of gene products organized by biological function, using curated protein family and subfamily classificationThe PANTHER database of protein families, subfamilies, functions and pathwaysAccurate prediction of the functional significance of single nucleotide polymorphisms and mutations in the ABCA1 geneThe BioPAX community standard for pathway data sharingBig data and other challenges in the quest for orthologsGene Ontology Consortium: going forwardStandardized benchmarking in the quest for orthologsPrinciples of protein folding--a perspective from simple exact models.PortEco: a resource for exploring bacterial biology through high-throughput data and analysis tools.Applications for protein sequence-function evolution data: mRNA/protein expression analysis and coding SNP scoring toolsPANTHER version 11: expanded annotation data from Gene Ontology and Reactome pathways, and data analysis tool enhancements.New developments in the InterPro database.PANTHER pathway: an ontology-based pathway database coupled with data analysis tools.The use of orthologous sequences to predict the impact of amino acid substitutions on protein function.GIGA: a simple, efficient algorithm for gene tree inference in the genomic age.Genome sequence of the necrotrophic plant pathogen Pythium ultimum reveals original pathogenicity mechanisms and effector repertoire.On the Use of Gene Ontology Annotations to Assess Functional Similarity among Orthologs and Paralogs: A Short Report.Phylogenetic-based propagation of functional annotations within the Gene Ontology consortiumLarge-scale gene function analysis with the PANTHER classification system.InterPro in 2017-beyond protein family and domain annotations.DRD1 associations with smoking abstinence across slow and normal nicotine metabolizers.PANTHER version 10: expanded protein families and functions, and analysis tools.Dopamine genes and nicotine dependence in treatment-seeking and community smokers.Nicotinic acetylcholine receptor beta2 subunit gene implicated in a systems-based candidate gene study of smoking cessation.An iterative method for extracting energy-like quantities from protein structures.Large-scale inference of gene function through phylogenetic annotation of Gene Ontology terms: case study of the apoptosis and autophagy cellular processesCoding single-nucleotide polymorphisms associated with complex vs. Mendelian disease: evolutionary evidence for differences in molecular effects.The Gene Ontology and the Meaning of Biological Function.Ontologies and standards in bioscience research: for machine or for humanA systems biology network model for genetic association studies of nicotine addiction and treatment.On the quality of tree-based protein classification.Kat3 coactivators in somatic stem cells and cancer stem cells: biological roles, evolution, and pharmacologic manipulation.Tools for Predicting the Functional Impact of Nonsynonymous Genetic Variation.PANTHER-PSEP: predicting disease-causing genetic variants using position-specific evolutionary preservation.The MEROPS database of proteolytic enzymes, their substrates and inhibitors in 2017 and a comparison with peptidases in the PANTHER database.InterPro in 2011: new developments in the family and domain prediction database.
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description
researcher ORCID ID = 0000-0002-9074-3507
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wetenschapper
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name
Paul D Thomas
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Paul D Thomas
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Paul D Thomas
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Paul D Thomas
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Paul D Thomas
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Paul D Thomas
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Paul D Thomas
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Paul D Thomas
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P D Thomas
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Paul D. Thomas
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Paul D Thomas
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Paul D Thomas
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Paul D Thomas
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Paul D Thomas
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0000-0002-9074-3507