Large-scale mapping and validation of Escherichia coli transcriptional regulation from a compendium of expression profiles - sprookjes - yvandenbroek - TriplyDB

Large-scale mapping and validation of Escherichia coli transcriptional regulation from a compendium of expression profiles

Large-scale mapping and validation of Escherichia coli transcriptional regulation from a compendium of expression profiles

http://www.wikidata.org/entity/Q21145898

about

Global functional atlas of Escherichia coli encompassing previously uncharacterized proteins A gene expression signature of emphysema-related lung destruction and its reversal by the tripeptide GHK Reconstruction of gene co-expression network from microarray data using local expression patterns Comparison of co-expression measures: mutual information, correlation, and model based indices A Parkinson's disease gene regulatory network identifies the signaling protein RGS2 as a modulator of LRRK2 activity and neuronal toxicity Wisdom of crowds for robust gene network inference Size matters: network inference tackles the genome scale How to Predict Molecular Interactions between Species?Forward Individualized Medicine from Personal Genomes to Interactomes Transcriptional Network Growing Models Using Motif-Based Preferential Attachment Regulatory network inferred using expression data of small sample size: application and validation in erythroid system A Glimpse to Background and Characteristics of Major Molecular Biological Networks Network-Based Integration of GWAS and Gene Expression Identifies a HOX-Centric Network Associated with Serous Ovarian Cancer Risk Reverse engineering and identification in systems biology: strategies, perspectives and challenges Predictive modelling of complex agronomic and biological systems Inferring regulatory networks from experimental morphological phenotypes: a computational method reverse-engineers planarian regeneration BRANE Cut: biologically-related a priori network enhancement with graph cuts for gene regulatory network inference.The Role of Transcription Factors at Antisense-Expressing Gene Pairs in Yeast.Differential Regulatory Analysis Based on Coexpression Network in Cancer Research Reverse enGENEering of Regulatory Networks from Big Data: A Roadmap for Biologists Quantitative and logic modelling of molecular and gene networks Data-driven integration of genome-scale regulatory and metabolic network models Oxidation of the guanine nucleotide pool underlies cell death by bactericidal antibiotics Modeling gene expression regulatory networks with the sparse vector autoregressive model The carbon assimilation network in Escherichia coli is densely connected and largely sign-determined by directions of metabolic fluxes Functional states of the genome-scale Escherichia coli transcriptional regulatory system Genetic interaction maps in Escherichia coli reveal functional crosstalk among cell envelope biogenesis pathways Identifying biological network structure, predicting network behavior, and classifying network state with High Dimensional Model Representation (HDMR)Bagging statistical network inference from large-scale gene expression data Using topology to tame the complex biochemistry of genetic networks Metabolic constraint-based refinement of transcriptional regulatory networks Receptor tyrosine kinases fall into distinct classes based on their inferred signaling networks MIDER: network inference with mutual information distance and entropy reduction Inference of gene regulatory networks incorporating multi-source biological knowledge via a state space model with L1 regularization A Protein Complex Map of Trypanosoma brucei Inference of Gene Regulatory Network Based on Local Bayesian Networks A validated regulatory network for Th17 cell specification BGRMI: A method for inferring gene regulatory networks from time-course gene expression data and its application in breast cancer research Toward an integrated software platform for systems pharmacology Inferring the relation between transcriptional and posttranscriptional regulation from expression compendia

P2860

Q21145830-C139598B-4C1D-4968-8DAA-6A3200C384C9 Q21183967-1E6B9A01-CD2C-4BDA-B0AF-EF747E36C39A Q21284298-35CC22F3-8CAC-415E-A4AE-FD3151FC537C Q21284318-202E7A7C-26E8-4734-9E38-1B37B5056B94 Q24296968-BCECCB4C-515E-495A-B8D5-DD16A2DCCA97 Q24604615-9F4AD144-03D1-4C3E-9EC2-4D8431F659C3 Q24678490-E4F18068-F5FB-4E96-8F6A-63BF3BADA545 Q26749581-F0A5C724-2302-4CC4-8A6A-CDB2B87FD5CA Q26773100-FF301A54-A0E6-4B0B-B418-96DD2BF348CB Q26777104-F777A0F0-9330-445F-A35E-5A0057D42FBD Q26779638-A9D8D3EC-EB11-4AAF-888B-4D5A7D8751A7 Q26780497-F86FBE88-B426-4B36-9E89-FE6F2E5F46D5 Q26799669-807EBD4E-1D2D-4AA2-81BE-C7C8A1498B1C Q27012931-061ADE22-DF04-4AC9-8651-B8AC0D991F22 Q27028227-6197788B-4AB6-4E46-800A-64E39E351512 Q27318756-621D9BB7-D060-450B-BADA-1CB8647C4ECF Q27319881-4FB5AF88-E196-439F-9330-90700A2936E6 Q27931130-440AD491-3BC4-4EF6-8757-97AFA3C06266 Q28067474-476C3C14-9422-4724-AEAC-AD8F6FDEE244 Q28083193-38F44C18-4118-4DA2-87AD-C46C3099CA36 Q28083248-5122212D-56AA-4F45-A9C4-7288F0D8CD0D Q28083689-69F686E5-3558-4A3B-8953-A1165AD1E452 Q28264943-8FAC1754-EB28-4F6B-A095-C99CF15143E4 Q28397039-0538D19B-AC0C-4092-BB34-3792312DFA2B Q28474349-D3B0A2A8-B562-409C-9855-2B7B73FD0759 Q28475555-7BE08D34-CDD2-4186-8A29-CE5DD005EA44 Q28478052-D3D336D6-130C-43B7-B11F-E9FAC044FDEF Q28480501-2880B4EC-B1B0-4866-8A12-E3E9BFFDFAE3 Q28482072-A48C9207-A1F8-45D6-AEF1-9DA944DFF402 Q28484856-55512411-D4AD-4820-BFAA-C69879572263 Q28536645-4BAFCA16-E2BA-4000-8A86-1908C1559E15 Q28537891-BB9EBBDA-23D3-43E3-8AF0-3D186C9C97B9 Q28538571-470FF788-A5FE-41E2-A428-7E3FD48C8084 Q28542589-C612F42D-3C59-4624-A29C-D14F241DA31D Q28550877-4D8DDDBF-C0CD-41BB-95DF-EE548AD7E213 Q28553341-BC3F440F-03E1-4440-B195-37833E96A72E Q28586624-AE10E958-678C-46B3-9DED-7288998E62B0 Q28595423-A95254EA-FEE1-4B92-A5FD-56F61F037DBA Q28650510-9A272520-2673-497B-AC83-BD6992185538 Q28658016-51634ACB-1BC1-4B65-BCA3-0EE31907CE84

P2860

Large-scale mapping and validation of Escherichia coli transcriptional regulation from a compendium of expression profiles

http://www.wikidata.org/entity/Q21145898

description

2007 nî lūn-bûn

@nan

2007 թուականի Յունուարին հրատարակուած գիտական յօդուած

@hyw

2007 թվականի հունվարին հրատարակված գիտական հոդված

@hy

2007年の論文

@ja

2007年論文

@yue

2007年論文

@zh-hant

2007年論文

@zh-hk

2007年論文

@zh-mo

2007年論文

@zh-tw

2007年论文

@wuu

name

Large-scale mapping and valida ...... pendium of expression profiles

@ast

Large-scale mapping and valida ...... pendium of expression profiles

@en

Large-scale mapping and valida ...... pendium of expression profiles

@en-gb

Large-scale mapping and valida ...... pendium of expression profiles

@nl

type

label

Large-scale mapping and valida ...... pendium of expression profiles

@ast

Large-scale mapping and valida ...... pendium of expression profiles

@en

Large-scale mapping and valida ...... pendium of expression profiles

@en-gb

Large-scale mapping and valida ...... pendium of expression profiles

@nl

altLabel

Large-Scale Mapping and Valida ...... pendium of Expression Profiles

@en

prefLabel

Large-scale mapping and valida ...... pendium of expression profiles

@ast

Large-scale mapping and valida ...... pendium of expression profiles

@en

Large-scale mapping and valida ...... pendium of expression profiles

@en-gb

Large-scale mapping and valida ...... pendium of expression profiles

@nl

P1433

Q21145898-34F55D74-8FDB-415B-85B8-1042B5BD8EFB

P1476

Q21145898-FB9EF419-5914-4E8D-9ED5-08930B780806

P2093

Q21145898-0A042A54-BF0D-432C-9FDE-7FC2CC500220

Q21145898-31DC608E-8DB0-484F-A537-C48FC38043EF

Q21145898-3D594A8C-1B74-48C0-8878-899A36F5722F

Q21145898-56D1ED1C-70A1-483F-81B2-AAFC6E6B4365

Q21145898-AAEF993C-36F7-407B-9927-D335BCC32BD5

Q21145898-D3D842E0-09F5-4FB9-89E3-92F9A3E9187B

Q21145898-EAA0251E-CCCF-42CD-8704-65F746917ABA

P2860

Q21145898-025A3B20-623E-4263-B0C3-077997530FD2

Q21145898-04E56157-6D92-4C45-837C-D41DFEB4E580

Q21145898-06B53664-9226-4164-8BAC-B725E18C6C75

Q21145898-090D7D36-FF3F-47B7-8BDA-C0B88A506E1E

Q21145898-0C820147-26DE-4F56-A8C4-AFD9D457D0B3

Q21145898-17D401AB-6B4F-4C0A-9DC1-243492140F11

Q21145898-1814233C-968E-4C9C-80F8-43B27EA091AF

Q21145898-19529A76-D955-491A-B57A-E69B8AD010AE

Q21145898-1FD28049-20CD-4D2B-8125-5F8EDDE10B35

Q21145898-218D3551-E304-44BA-B030-C45D9F65DA37

P304

Q21145898-5FAF400A-46BB-4A1A-8824-3C72AEBE4461

P31

Q21145898-73A1ED3D-B20D-46E7-89A5-2455226BAC2B

P3181

Q21145898-38D702EA-F904-4E13-AFCB-8E0802BE33AA

P356

Q21145898-2E11DA92-D044-4AF5-AAEA-AB2988E1F746

P407

Q21145898-63F9BE16-E040-40AF-915F-E4E3A6B2E8A1

P433

Q21145898-5BD5F87B-0889-4AD7-A6EA-CC3FF89621C7

P478

Q21145898-ED773039-9D61-4131-A3AF-30187D92AF5E

P50

Q21145898-00BCC1A7-DDB7-4DBF-A2E2-E6748A04EBAB

Q21145898-C72520E2-C045-40D2-8FEE-C9B3B60DD45D

P577

Q21145898-ADDAE736-5E8D-4B15-8180-5A160A53DF55

P5875

Q21145898-CD004641-0100-4F22-BF19-8648F662E2A2

P698

Q21145898-69A91E17-B138-4FD0-A500-F787838DA07C

P921

Q21145898-0EA2189F-2F54-4AD0-8594-EF7E310901E8

P932

Q21145898-D0301F49-13EF-46B8-8562-79B4A1581EA6

P3181

P356

JOURNAL.PBIO.0050008

P1433

P1476

Large-scale mapping and valida ...... pendium of expression profiles

@en

P2093

Guillaume Cottarel

http://www.w3.org/2001/XMLSchema#string

Ilaria Mogno

http://www.w3.org/2001/XMLSchema#string

James J Collins

http://www.w3.org/2001/XMLSchema#string

Jamey Wierzbowski

http://www.w3.org/2001/XMLSchema#string

Jeremiah J Faith

http://www.w3.org/2001/XMLSchema#string

Joshua T Thaden

http://www.w3.org/2001/XMLSchema#string

Timothy S Gardner

http://www.w3.org/2001/XMLSchema#string

P2860

ARACNE: An Algorithm for the Reconstruction of Gene Regulatory Networks in a Mammalian Cellular Context

Cluster analysis and display of genome-wide expression patterns

Estimating mutual information using B-spline functions--an improved similarity measure for analysing gene expression data

EcoCyc: a comprehensive database resource for Escherichia coli

RegulonDB (version 5.0): Escherichia coli K-12 transcriptional regulatory network, operon organization, and growth conditions

Fitting a mixture model by expectation maximization to discover motifs in biopolymers

Model-based analysis of oligonucleotide arrays: expression index computation and outlier detection

One-step inactivation of chromosomal genes in Escherichia coli K-12 using PCR products

Transcriptional regulatory networks in Saccharomyces cerevisiae

Summaries of Affymetrix GeneChip probe level data

P304

e8

http://www.w3.org/2001/XMLSchema#string

P31

scholarly article

P3181

1010245

http://www.w3.org/2001/XMLSchema#string

P356

10.1371/JOURNAL.PBIO.0050008

http://www.w3.org/2001/XMLSchema#string

P407

P433

1

http://www.w3.org/2001/XMLSchema#string

P478

5

http://www.w3.org/2001/XMLSchema#string

P50

P577

2007-01-01T00:00:00Z

http://www.w3.org/2001/XMLSchema#dateTime

P5875

6586006

http://www.w3.org/2001/XMLSchema#string

P698

17214507

http://www.w3.org/2001/XMLSchema#string

P921

Escherichia coli

P932

1764438

http://www.w3.org/2001/XMLSchema#string