High-resolution transcriptome maps reveal strain-specific regulatory features of multiple Campylobacter jejuni isolates - sprookjes - yvandenbroek - TriplyDB

High-resolution transcriptome maps reveal strain-specific regulatory features of multiple Campylobacter jejuni isolates

High-resolution transcriptome maps reveal strain-specific regulatory features of multiple Campylobacter jejuni isolates

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READemption-a tool for the computational analysis of deep-sequencing-based transcriptome data RNA sequencing analysis of the broad-host-range strain Sinorhizobium fredii NGR234 identifies a large set of genes linked to quorum sensing-dependent regulation in the background of a traI and ngrI deletion mutant RNase J is required for processing of a small number of RNAs in Rhodobacter sphaeroides Evolution of resistance to a last-resort antibiotic in Staphylococcus aureus via bacterial competition Differential RNA-seq of Vibrio cholerae identifies the VqmR small RNA as a regulator of biofilm formation dRNA-Seq Reveals Genomewide TSSs and Noncoding RNAs of Plant Beneficial Rhizobacterium Bacillus amyloliquefaciens FZB42 Global transcriptional start site mapping using differential RNA sequencing reveals novel antisense RNAs in Escherichia coli The Bacteriophage Carrier State of Campylobacter jejuni Features Changes in Host Non-coding RNAs and the Acquisition of New Host-derived CRISPR Spacer Sequences New Technologies for Studying Biofilms Biogenesis pathways of RNA guides in archaeal and bacterial CRISPR-Cas adaptive immunity Single-cell RNA-seq: advances and future challenges Genome stability of Propionibacterium acnes: a comprehensive study of indels and homopolymeric tracts The primary transcriptome of the Escherichia coli O104:H4 pAA plasmid and novel insights into its virulence gene expression and regulation Regulatory RNAs in photosynthetic cyanobacteria CopraRNA and IntaRNA: predicting small RNA targets, networks and interaction domains OperomeDB: A Database of Condition-Specific Transcription Units in Prokaryotic Genomes TSSAR: TSS annotation regime for dRNA-seq data.Bioinformatics of prokaryotic RNAs Small Regulatory RNAs of Rickettsia conorii sRNA154 a newly identified regulator of nitrogen fixation in Methanosarcina mazei strain Gö1 Transcription Profiling of Bacillus subtilis Cells Infected with AR9, a Giant Phage Encoding Two Multisubunit RNA Polymerases Genome-wide identification of transcriptional start sites in the haloarchaeon Haloferax volcanii based on differential RNA-Seq (dRNA-Seq)Primary transcriptome map of the hyperthermophilic archaeon Thermococcus kodakarensis Diversity of the Epsilonproteobacteria Dsb (disulfide bond) systems.Characterization of CRISPR RNA transcription by exploiting stranded metatranscriptomic data.The complete Campylobacter jejuni transcriptome during colonization of a natural host determined by RNAseq.dRNA-seq transcriptional profiling of the FK506 biosynthetic gene cluster in Streptomyces tsukubaensis NRRL18488 and general analysis of the transcriptome An RpoHI-Dependent Response Promotes Outgrowth after Extended Stationary Phase in the Alphaproteobacterium Rhodobacter sphaeroides Genome-wide fitness analyses of the foodborne pathogen Campylobacter jejuni in in vitro and in vivo models.ToNER: A tool for identifying nucleotide enrichment signals in feature-enriched RNA-seq data RNAseq Reveals Complex Response of Campylobacter jejuni to Ovine Bile and In vivo Gallbladder Environment.The primary transcriptome of Neisseria meningitidis and its interaction with the RNA chaperone Hfq.In vivo mRNA profiling of uropathogenic Escherichia coli from diverse phylogroups reveals common and group-specific gene expression profiles It takes two to tango: two TatA paralogues and two redox enzyme-specific chaperones are involved in the localization of twin-arginine translocase substrates in Campylobacter jejuni.Conservation of transcription start sites within genes across a bacterial genus.The RNase R from Campylobacter jejuni has unique features and is involved in the first steps of infection.A variable homopolymeric G-repeat defines small RNA-mediated posttranscriptional regulation of a chemotaxis receptor in Helicobacter pylori.Parallel evolution of genome structure and transcriptional landscape in the Epsilonproteobacteria.The transcriptional landscape of Campylobacter jejuni under iron replete and iron limited growth conditions.Genome-wide mapping of transcriptional start sites defines an extensive leaderless transcriptome in Mycobacterium tuberculosis.

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High-resolution transcriptome maps reveal strain-specific regulatory features of multiple Campylobacter jejuni isolates

http://www.wikidata.org/entity/Q24489927

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2013 nî lūn-bûn

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2013 թուականի Մայիսին հրատարակուած գիտական յօդուած

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2013 թվականի մայիսին հրատարակված գիտական հոդված

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2013年の論文

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High-resolution transcriptome ...... Campylobacter jejuni isolates

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High-resolution transcriptome ...... Campylobacter jejuni isolates

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High-resolution transcriptome ...... Campylobacter jejuni isolates

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High-resolution transcriptome ...... Campylobacter jejuni isolates

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High-resolution transcriptome ...... Campylobacter jejuni isolates

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High-resolution transcriptome ...... Campylobacter jejuni isolates

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High-resolution transcriptome ...... Campylobacter jejuni isolates

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High-resolution transcriptome ...... Campylobacter jejuni isolates

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High-resolution transcriptome ...... Campylobacter jejuni isolates

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A genome-wide survey of sRNAs in the symbiotic nitrogen-fixing alpha-proteobacterium Sinorhizobium meliloti

Major structural differences and novel potential virulence mechanisms from the genomes of multiple campylobacter species

BLAST+: architecture and applications

The genome sequence of the food-borne pathogen Campylobacter jejuni reveals hypervariable sequences

Small RNA genes expressed from Staphylococcus aureus genomic and pathogenicity islands with specific expression among pathogenic strains.

RNA-Seq: a revolutionary tool for transcriptomics

RNA-guided human genome engineering via Cas9

Multiplex genome engineering using CRISPR/Cas systems

Genome-wide transcriptome analysis of the plant pathogen Xanthomonas identifies sRNAs with putative virulence functions

CRISPR RNA maturation by trans-encoded small RNA and host factor RNase III

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