Novel RNAs identified from an in-depth analysis of the transcriptome of human chromosomes 21 and 22 - sprookjes - yvandenbroek - TriplyDB

Novel RNAs identified from an in-depth analysis of the transcriptome of human chromosomes 21 and 22

Novel RNAs identified from an in-depth analysis of the transcriptome of human chromosomes 21 and 22

http://www.wikidata.org/entity/Q24594479

about

Most "dark matter" transcripts are associated with known genes A user's guide to the encyclopedia of DNA elements (ENCODE)Discovery of tissue-specific exons using comprehensive human exon microarrays Complex Loci in human and mouse genomes EGASP: the human ENCODE Genome Annotation Assessment Project Cell array-based intracellular localization screening reveals novel functional features of human chromosome 21 proteins The Retinome - defining a reference transcriptome of the adult mammalian retina/retinal pigment epithelium Genome annotation of a 1.5 Mb region of human chromosome 6q23 encompassing a quantitative trait locus for fetal hemoglobin expression in adults Identification of novel non-coding small RNAs from Streptococcus pneumoniae TIGR4 using high-resolution genome tiling arrays Species-specific transcription in mice carrying human chromosome 21 Examples of the complex architecture of the human transcriptome revealed by RACE and high-density tiling arrays Organization of the Caenorhabditis elegans small non-coding transcriptome: genomic features, biogenesis, and expression A noncoding RNA is a potential marker of cell fate during mammary gland development.Cryptic genetic variation is enriched for potential adaptations Partition function and base pairing probabilities of RNA heterodimers A hidden Markov model approach for determining expression from genomic tiling micro arrays Fast and reliable prediction of noncoding RNAs A comprehensive comparison of comparative RNA structure prediction approaches Over 20% of human transcripts might form sense-antisense pairs Fine expression profiling of full-length transcripts using a size-unbiased cDNA library prepared with the vector-capping method High-resolution mapping of plasmid transcriptomes in different host bacteria Prominent use of distal 5' transcription start sites and discovery of a large number of additional exons in ENCODE regions The DART classification of unannotated transcription within the ENCODE regions: associating transcription with known and novel loci RNAdb--a comprehensive mammalian noncoding RNA database The Human Anatomic Gene Expression Library (H-ANGEL), the H-Inv integrative display of human gene expression across disparate technologies and platforms A microarray configuration to quantify expression levels and relative abundance of splice variants.An oligonucleotide microarray for microRNA expression analysis based on labeling RNA with quantum dot and nanogold probe Analysis of alternative splicing with microarrays: successes and challenges A comprehensive transcript index of the human genome generated using microarrays and computational approaches Naturally occurring antisense RNA of histone H2a in mouse cultured cell lines Genomic mapping of RNA polymerase II reveals sites of co-transcriptional regulation in human cells.A systematic search for new mammalian noncoding RNAs indicates little conserved intergenic transcription Tiling microarray analysis of rice chromosome 10 to identify the transcriptome and relate its expression to chromosomal architecture Evidence for selection on synonymous mutations affecting stability of mRNA secondary structure in mammals Experimental approaches to identify non-coding RNAs Microarray-based DNA methylation profiling: technology and applications.Djinn Lite: a tool for customised gene transcript modelling, annotation-data enrichment and exploration RNA-Seq technology and its application in fish transcriptomics Long non-coding RNA-dependent transcriptional regulation in neuronal development and disease MicroRNA regulation of T-lymphocyte immunity: modulation of molecular networks responsible for T-cell activation, differentiation, and development

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Novel RNAs identified from an in-depth analysis of the transcriptome of human chromosomes 21 and 22

http://www.wikidata.org/entity/Q24594479

description

2004 nî lūn-bûn

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2004 թուականի Մարտին հրատարակուած գիտական յօդուած

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2004 թվականի մարտին հրատարակված գիտական հոդված

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Novel RNAs identified from an ...... of human chromosomes 21 and 22

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Novel RNAs identified from an ...... of human chromosomes 21 and 22

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Genome Research

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Novel RNAs identified from an ...... of human chromosomes 21 and 22

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Antonio Piccolboni

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Dione Kampa

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Gregg Helt

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Hari Tammana

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Jill Cheng

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Mark Yamanaka

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Shane Brubaker

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Simon Cawley

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Stefan Bekiranov

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Thomas R Gingeras

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Initial sequencing and analysis of the human genome

The Sequence of the Human Genome

A polymorphic gene nested within an intron of the tau gene: implications for Alzheimer's disease.

Reevaluating human gene annotation: a second-generation analysis of chromosome 22

Light-generated oligonucleotide arrays for rapid DNA sequence analysis

The human genome browser at UCSC

The transcriptional activity of human Chromosome 22

Computational discovery of sense-antisense transcription in the human and mouse genomes

A comparison of normalization methods for high density oligonucleotide array data based on variance and bias

The UCSC Genome Browser Database

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331-42

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3660082

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10.1101/GR.2094104

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3

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Philipp Kapranov

Stefan Bekiranov

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8681548

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