Statistical analysis of interface similarity in crystals of homologous proteins - sprookjes - yvandenbroek - TriplyDB

Statistical analysis of interface similarity in crystals of homologous proteins

Statistical analysis of interface similarity in crystals of homologous proteins

http://www.wikidata.org/entity/Q24647980

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The protein common interface database (ProtCID)--a comprehensive database of interactions of homologous proteins in multiple crystal forms Dynamic dissociating homo-oligomers and the control of protein function Assignment of protein sequences to existing domain and family classification systems: Pfam and the PDB Improved prediction of protein side-chain conformations with SCWRL4 Understanding the fabric of protein crystals: computational classification of biological interfaces and crystal contacts Der p 5 Crystal Structure Provides Insight into the Group 5 Dust Mite Allergens Crystal Structure of Bacillus anthracis Phosphoglucosamine Mutase, an Enzyme in the Peptidoglycan Biosynthetic Pathway The Transition from Closed to Open Conformation of Treponema pallidum Outer Membrane-associated Lipoprotein TP0453 Involves Membrane Sensing and Integration by Two Amphipathic Helices Structural and Functional Characterization of ScsC, a Periplasmic Thioredoxin-Like Protein from Salmonella enterica Serovar Typhimurium Structural and Biophysical Characterization of the Cytoplasmic Domains of Human BAP29 and BAP31 The antigen 43 structure reveals a molecular Velcro-like mechanism of autotransporter-mediated bacterial clumping Crystal structure of the Yersinia enterocolitica type III secretion chaperone SycD in complex with a peptide of the minor translocator YopD The Landscape of Intertwined Associations in Homooligomeric Proteins Identifying three-dimensional structures of autophosphorylation complexes in crystals of protein kinases BioAssemblyModeler (BAM): user-friendly homology modeling of protein homo- and heterooligomers A 3-dimensional trimeric β-barrel model for Chlamydia MOMP contains conserved and novel elements of Gram-negative bacterial porins Assessment of protein side-chain conformation prediction methods in different residue environments.Biological function derived from predicted structures in CASP11.MET-activating Residues in the B-repeat of the Listeria monocytogenes Invasion Protein InlB.Predicting permanent and transient protein-protein interfaces.Evolution of protein binding modes in homooligomers.Analysis of SecA dimerization in solution.ANCHOR: a web server and database for analysis of protein-protein interaction binding pockets for drug discovery.Modulation of quaternary structure of S100 proteins by calcium ions.Homology inference of protein-protein interactions via conserved binding sites.Protein interface classification by evolutionary analysis.Testing computational prediction of missense mutation phenotypes: functional characterization of 204 mutations of human cystathionine beta synthase A PDB-wide, evolution-based assessment of protein-protein interfaces.The structure of bradyzoite-specific enolase from Toxoplasma gondii reveals insights into its dual cytoplasmic and nuclear functions.Conservation of inner nuclear membrane targeting sequences in mammalian Pom121 and yeast Heh2 membrane proteins.Structural characterization and modeling of the Borrelia burgdorferi hybrid histidine kinase Hk1 periplasmic sensor: A system for sensing small molecules associated with tick feeding.Vancomycin forms ligand-mediated supramolecular complexes.Non-redundant unique interface structures as templates for modeling protein interactions Improving predictions of protein-protein interfaces by combining amino acid-specific classifiers based on structural and physicochemical descriptors with their weighted neighbor averages.A computational interactome for prioritizing genes associated with complex agronomic traits in rice (Oryza sativa).Structure-guided sequence specificity engineering of the modification-dependent restriction endonuclease LpnPI.Structure of a single-chain Fv bound to the 17 N-terminal residues of huntingtin provides insights into pathogenic amyloid formation and suppression.Modeling protein quaternary structure of homo- and hetero-oligomers beyond binary interactions by homology.Structural templates for modeling homodimers.An unusually small dimer interface is observed in all available crystal structures of cytosolic sulfotransferases

P2860

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P2860

Statistical analysis of interface similarity in crystals of homologous proteins

http://www.wikidata.org/entity/Q24647980

description

2008 nî lūn-bûn

@nan

2008 թուականի Օգոստոսին հրատարակուած գիտական յօդուած

@hyw

2008 թվականի օգոստոսին հրատարակված գիտական հոդված

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2008年の論文

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2008年学术文章

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2008年学术文章

@zh-cn

2008年学术文章

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2008年学术文章

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2008年学术文章

@zh-sg

2008年學術文章

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name

Statistical analysis of interface similarity in crystals of homologous proteins

@ast

Statistical analysis of interface similarity in crystals of homologous proteins

@en

Statistical analysis of interface similarity in crystals of homologous proteins

@nl

type

label

Statistical analysis of interface similarity in crystals of homologous proteins

@ast

Statistical analysis of interface similarity in crystals of homologous proteins

@en

Statistical analysis of interface similarity in crystals of homologous proteins

@nl

prefLabel

Statistical analysis of interface similarity in crystals of homologous proteins

@ast

Statistical analysis of interface similarity in crystals of homologous proteins

@en

Statistical analysis of interface similarity in crystals of homologous proteins

@nl

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J.JMB.2008.06.002

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Journal of Molecular Biology

P1476

Statistical analysis of interface similarity in crystals of homologous proteins

@en

P2093

Adrian A Canutescu

http://www.w3.org/2001/XMLSchema#string

Guoli Wang

http://www.w3.org/2001/XMLSchema#string

Maxim Shapovalov

http://www.w3.org/2001/XMLSchema#string

Qifang Xu

http://www.w3.org/2001/XMLSchema#string

Zoran Obradovic

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P2860

The RUNX1 Runt domain at 1.25A resolution: a structural switch and specifically bound chloride ions modulate DNA binding

The Protein Data Bank

3D domain swapping: a mechanism for oligomer assembly

BRENDA, AMENDA and FRENDA: the enzyme information system in 2007

PISCES: recent improvements to a PDB sequence culling server

Binding properties and evolution of homodimers in protein-protein interaction networks

SCOPPI: a structural classification of protein-protein interfaces

NOXclass: prediction of protein-protein interaction types.

Crystallographic studies on endothelial nitric oxide synthase complexed with nitric oxide and mechanism-based inhibitors

The structure of human beta-defensin-1: new insights into structural properties of beta-defensins

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487-507

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scholarly article

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10.1016/J.JMB.2008.06.002

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2

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381

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Roland Dunbrack

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2008-08-29T00:00:00Z

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5254454

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18599072

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2573399

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