Sustained oscillations of NF-kappaB produce distinct genome scanning and gene expression profiles - sprookjes - yvandenbroek - TriplyDB

Sustained oscillations of NF-kappaB produce distinct genome scanning and gene expression profiles

Sustained oscillations of NF-kappaB produce distinct genome scanning and gene expression profiles

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Maternal undernutrition and cardiometabolic disease: a Latin American perspective Roles of spatial parameters on the oscillation of nuclear NF-κB: computer simulations of a 3D spherical cell High-throughput analysis of NF-κB dynamics in single cells reveals basal nuclear localization of NF-κB and spontaneous activation of oscillations Signal transduction controls heterogeneous NF-κB dynamics and target gene expression through cytokine-specific refractory states.Lessons from mathematically modeling the NF-κB pathway.NF-κB signalling and cell fate decisions in response to a short pulse of tumour necrosis factor.Complex dynamics of transcription regulation.High-throughput and single-cell imaging of NF-kappaB oscillations using monoclonal cell lines.An innovative method to classify SERMs based on the dynamics of estrogen receptor transcriptional activity in living animals.Population robustness arising from cellular heterogeneity Differential gene expression regulated by oscillatory transcription factors.PSExplorer: whole parameter space exploration for molecular signaling pathway dynamics p53 dynamics control cell fate Encoding and decoding cellular information through signaling dynamics.Single-cell and population NF-κB dynamic responses depend on lipopolysaccharide preparation.Genetically encodable fluorescent biosensors for tracking signaling dynamics in living cells.Fluctuating vs. continuous exposure to H₂O₂: the effects on mitochondrial membrane potential, intracellular calcium, and NF-κB in astroglia Single-cell variation leads to population invariance in NF-κB signaling dynamics Dynamic regulation of transcriptional states by chromatin and transcription factors.Live cell imaging unveils multiple domain requirements for in vivo dimerization of the glucocorticoid receptor.Cell shape and the microenvironment regulate nuclear translocation of NF-κB in breast epithelial and tumor cells.Regulation of nuclear NF-κB oscillation by a diffusion coefficient and its biological implications Sources of cell-to-cell variability in canonical nuclear factor-κB (NF-κB) signaling pathway inferred from single cell dynamic images.Regulation of NF-κB Oscillation by Nuclear Transport: Mechanisms Determining the Persistency and Frequency of Oscillation Recent advances in single-cell studies of gene regulation.NPD1-mediated stereoselective regulation of BIRC3 expression through cREL is decisive for neural cell survival.Nonlinear dependencies of biochemical reactions for context-specific signaling dynamics.Interrogation of inhibitor of nuclear factor κB α/nuclear factor κB (IκBα/NF-κB) negative feedback loop dynamics: from single cells to live animals in vivo.What do expression dynamics tell us about the mechanism of transcription?Oxytocin-stimulated NFAT transcriptional activation in human myometrial cells.Identification of a NF-κB cardioprotective gene program: NF-κB regulation of Hsp70.1 contributes to cardioprotection after permanent coronary occlusion NF-κB oscillations translate into functionally related patterns of gene expression.Modulation of Macrophage Inflammatory Nuclear Factor κB (NF-κB) Signaling by Intracellular Cryptococcus neoformans β-Transducin repeat-containing protein 1 (β-TrCP1)-mediated silencing mediator of retinoic acid and thyroid hormone receptor (SMRT) protein degradation promotes tumor necrosis factor α (TNFα)-induced inflammatory gene expression.A checklist for successful quantitative live cell imaging in systems biology Switching of the relative dominance between feedback mechanisms in lipopolysaccharide-induced NF-κB signaling Live cell imaging and systems biology.Assembly of the transcription machinery: ordered and stable, random and dynamic, or both?Topology, dynamics, and heterogeneity in immune signaling.MicroRNA-155 promotes resolution of hypoxia-inducible factor 1alpha activity during prolonged hypoxia.

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Sustained oscillations of NF-kappaB produce distinct genome scanning and gene expression profiles

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Sustained oscillations of NF-k ...... g and gene expression profiles

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Sustained oscillations of NF-k ...... g and gene expression profiles

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Sustained oscillations of NF-k ...... g and gene expression profiles

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Sustained oscillations of NF-k ...... g and gene expression profiles

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Sustained oscillations of NF-k ...... g and gene expression profiles

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Anindya Indrawan

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Gordon L Hager

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Luigi Salvatore

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Rossana De Lorenzi

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P2860

Oscillations in NF-kappaB signaling control the dynamics of gene expression

Shared principles in NF-kappaB signaling

The IkappaB-NF-kappaB signaling module: temporal control and selective gene activation

The segment polarity network is a robust developmental module

Oscillations and variability in the p53 system

Line FRAP with the confocal laser scanning microscope for diffusion measurements in small regions of 3-D samples

A plausible model for the digital response of p53 to DNA damage.

Purified human I kappa B can rapidly dissociate the complex of the NF-kappa B transcription factor with its cognate DNA.

Rapid periodic binding and displacement of the glucocorticoid receptor during chromatin remodeling.

Global nature of dynamic protein-chromatin interactions in vivo: three-dimensional genome scanning and dynamic interaction networks of chromatin proteins.

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Marco E. Bianchi

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26853970

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