Identifying transcription factor functions and targets by phenotypic activation. - sprookjes - yvandenbroek - TriplyDB

Identifying transcription factor functions and targets by phenotypic activation.

Identifying transcription factor functions and targets by phenotypic activation.

http://www.wikidata.org/entity/Q27936626

about

Learning a prior on regulatory potential from eQTL data YeTFaSCo: a database of evaluated yeast transcription factor sequence specificities YEASTRACT-DISCOVERER: new tools to improve the analysis of transcriptional regulatory associations in Saccharomyces cerevisiae Arsenic toxicity to Saccharomyces cerevisiae is a consequence of inhibition of the TORC1 kinase combined with a chronic stress response High-resolution DNA-binding specificity analysis of yeast transcription factors.Membrane-active compounds activate the transcription factors Pdr1 and Pdr3 connecting pleiotropic drug resistance and membrane lipid homeostasis in saccharomyces cerevisiae Genetic interactions of MAF1 identify a role for Med20 in transcriptional repression of ribosomal protein genes A Ham1p-dependent mechanism and modulation of the pyrimidine biosynthetic pathway can both confer resistance to 5-fluorouracil in yeast Reconstruction of biochemical networks in microorganisms A proof of the DBRF-MEGN method, an algorithm for deducing minimum equivalent gene networks.Mapping functional transcription factor networks from gene expression data.PhosphoChain: a novel algorithm to predict kinase and phosphatase networks from high-throughput expression data Mechanisms of cell cycle control revealed by a systematic and quantitative overexpression screen in S. cerevisiae Uncovering transcriptional interactions via an adaptive fuzzy logic approach Inference of gene regulation functions from dynamic transcriptome data.Inferring activity changes of transcription factors by binding association with sorted expression profiles Comparison of transcription regulatory interactions inferred from high-throughput methods: what do they reveal?Transcription factor control of growth rate dependent genes in Saccharomyces cerevisiae: a three factor design.Selective inhibition of yeast regulons by daunorubicin: a transcriptome-wide analysis.Inferring condition-specific modulation of transcription factor activity in yeast through regulon-based analysis of genomewide expression.Robustness of transcriptional regulatory program influences gene expression variability.Characterizing regulatory path motifs in integrated networks using perturbational data.Comprehensive reanalysis of transcription factor knockout expression data in Saccharomyces cerevisiae reveals many new targets Simultaneous clustering of multiple gene expression and physical interaction datasets.The histone H3K36 methyltransferase MES-4 acts epigenetically to transmit the memory of germline gene expression to progeny.Information propagation within the Genetic Network of Saccharomyces cerevisiae.TF-centered downstream gene set enrichment analysis: Inference of causal regulators by integrating TF-DNA interactions and protein post-translational modifications information.Transcriptional control of the quorum sensing response in yeast.A versatile overexpression strategy in the pathogenic yeast Candida albicans: identification of regulators of morphogenesis and fitness Passing messages between biological networks to refine predicted interactions.Identification of potential calorie restriction-mimicking yeast mutants with increased mitochondrial respiratory chain and nitric oxide levels.Quantitative cell array screening to identify regulators of gene expression.Anaphase promoting complex-dependent degradation of transcriptional repressors Nrm1 and Yhp1 in Saccharomyces cerevisiae Learning gene networks under SNP perturbations using eQTL datasets.De-novo learning of genome-scale regulatory networks in S. cerevisiae.Targeted changes of the cell wall proteome influence Candida albicans ability to form single- and multi-strain biofilms Transcriptional regulation in Saccharomyces cerevisiae: transcription factor regulation and function, mechanisms of initiation, and roles of activators and coactivators.Fast-acting and nearly gratuitous induction of gene expression and protein depletion in Saccharomyces cerevisiae.Transcriptional regulation and the diversification of metabolism in wine yeast strains.Reconstruction of novel transcription factor regulons through inference of their binding sites.

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P2860

Identifying transcription factor functions and targets by phenotypic activation.

http://www.wikidata.org/entity/Q27936626

description

2006 nî lūn-bûn

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2006 թուականի Օգոստոսին հրատարակուած գիտական յօդուած

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2006 թվականի օգոստոսին հրատարակված գիտական հոդված

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2006年の論文

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2006年学术文章

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2006年学术文章

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2006年学术文章

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2006年学术文章

@zh-my

2006年学术文章

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2006年學術文章

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name

Identifying transcription factor functions and targets by phenotypic activation.

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Identifying transcription factor functions and targets by phenotypic activation.

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Identifying transcription factor functions and targets by phenotypic activation.

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type

label

Identifying transcription factor functions and targets by phenotypic activation.

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Identifying transcription factor functions and targets by phenotypic activation.

@en

Identifying transcription factor functions and targets by phenotypic activation.

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prefLabel

Identifying transcription factor functions and targets by phenotypic activation.

@ast

Identifying transcription factor functions and targets by phenotypic activation.

@en

Identifying transcription factor functions and targets by phenotypic activation.

@nl

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PNAS.0605140103

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Proceedings of the National Academy of Sciences of the United States of America

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Identifying transcription factor functions and targets by phenotypic activation.

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Brenda J Andrews

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Brendan J Frey

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Charles Boone

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Gordon Chua

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Owen Ryan

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Richelle Sopko

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Timothy R Hughes

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P2860

Finding Functional Features in Saccharomyces Genomes by Phylogenetic Footprinting

Sequencing and comparison of yeast species to identify genes and regulatory elements

Evolutionarily conserved elements in vertebrate, insect, worm, and yeast genomes.

Defining transcriptional networks through integrative modeling of mRNA expression and transcription factor binding data

Exploring the metabolic and genetic control of gene expression on a genomic scale

Mapping pathways and phenotypes by systematic gene overexpression.

Regulators of pseudohyphal differentiation in Saccharomyces cerevisiae identified through multicopy suppressor analysis in ammonium permease mutant strains

Exploration of essential gene functions via titratable promoter alleles.

Transcriptional regulatory code of a eukaryotic genome.

Cloning and sequencing of URA10, a second gene encoding orotate phosphoribosyl transferase in Saccharomyces cerevisiae.

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10.1073/PNAS.0605140103

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32

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103

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Mark D. Robinson

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