FUGUE: sequence-structure homology recognition using environment-specific substitution tables and structure-dependent gap penalties
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Discarding functional residues from the substitution table improves predictions of active sites within three-dimensional structuresRecent evolutions of multiple sequence alignment algorithmsA comprehensive update of the sequence and structure classification of kinasesA phylogenomic profile of globinsDrosophila neurotrophins reveal a common mechanism for nervous system formationAdvances in Homology Protein Structure ModelingProgress and challenges in protein structure predictionIdentification of the fibroblast growth factor (FGF)-interacting domain in a secreted FGF-binding protein by phage displayDNA repair. PAXX, a paralog of XRCC4 and XLF, interacts with Ku to promote DNA double-strand break repairERp57 is essential for efficient folding of glycoproteins sharing common structural domainsA TIR domain variant of MyD88 adapter-like (Mal)/TIRAP results in loss of MyD88 binding and reduced TLR2/TLR4 signalingStructural basis for cell surface patterning through NetrinG-NGL interactionsCytoskeletal protein 4.1G binds to the third intracellular loop of the A1 adenosine receptor and inhibits receptor actionRole of the UBL-UBA protein KPC2 in degradation of p27 at G1 phase of the cell cycle.Template-based protein structure modelingI-TASSER: a unified platform for automated protein structure and function predictionDiazepam-bound GABAA receptor models identify new benzodiazepine binding-site ligandsBioShell Threader: protein homology detection based on sequence profiles and secondary structure profilesImproving protein fold recognition and template-based modeling by employing probabilistic-based matching between predicted one-dimensional structural properties of query and corresponding native properties of templatesRaptorX: exploiting structure information for protein alignment by statistical inferenceMUSTER: Improving protein sequence profile-profile alignments by using multiple sources of structure informationCoarse-grained modeling of large RNA molecules with knowledge-based potentials and structural filtersStructure of the Plasmodium falciparum circumsporozoite protein, a leading malaria vaccine candidateSequence context-specific profiles for homology searchingMutagenesis and functional characterization of the RNA and protein components of the toxIN abortive infection and toxin-antitoxin locus of ErwiniaAn Arabidopsis GPI-anchor plasmodesmal neck protein with callose binding activity and potential to regulate cell-to-cell traffickingA newly discovered protein export machine in malaria parasitesHomology modeling using parametric alignment ensemble generation with consensus and energy-based model selectionLOMETS: a local meta-threading-server for protein structure predictionEvDTree: structure-dependent substitution profiles based on decision tree classification of 3D environmentsDomain analysis of the tubulin cofactor system: a model for tubulin folding and dimerizationDeciphering structure and topology of conserved COG2042 orphan proteinsIdentification of a new family of putative PD-(D/E)XK nucleases with unusual phylogenomic distribution and a new type of the active siteFormin homology 2 domains occur in multiple contexts in angiospermsLCN6, a novel human epididymal lipocalinA homology model of restriction endonuclease SfiI in complex with DNAHuman glutaminyl cyclase and bacterial zinc aminopeptidase share a common fold and active siteThe Spin/Ssty repeat: a new motif identified in proteins involved in vertebrate development from gamete to embryoA plant natriuretic peptide-like gene in the bacterial pathogen Xanthomonas axonopodis may induce hyper-hydration in the plant host: a hypothesis of molecular mimicryEstimates of statistical significance for comparison of individual positions in multiple sequence alignments
P2860
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P2860
FUGUE: sequence-structure homology recognition using environment-specific substitution tables and structure-dependent gap penalties
description
2001 nî lūn-bûn
@nan
2001 թուականի Յունիսին հրատարակուած գիտական յօդուած
@hyw
2001 թվականի հունիսին հրատարակված գիտական հոդված
@hy
2001年の論文
@ja
2001年論文
@yue
2001年論文
@zh-hant
2001年論文
@zh-hk
2001年論文
@zh-mo
2001年論文
@zh-tw
2001年论文
@wuu
name
FUGUE: sequence-structure homo ...... ucture-dependent gap penalties
@ast
FUGUE: sequence-structure homo ...... ucture-dependent gap penalties
@en
FUGUE: sequence-structure homo ...... ucture-dependent gap penalties
@nl
type
label
FUGUE: sequence-structure homo ...... ucture-dependent gap penalties
@ast
FUGUE: sequence-structure homo ...... ucture-dependent gap penalties
@en
FUGUE: sequence-structure homo ...... ucture-dependent gap penalties
@nl
prefLabel
FUGUE: sequence-structure homo ...... ucture-dependent gap penalties
@ast
FUGUE: sequence-structure homo ...... ucture-dependent gap penalties
@en
FUGUE: sequence-structure homo ...... ucture-dependent gap penalties
@nl
P3181
P356
P1476
FUGUE: sequence-structure homo ...... ucture-dependent gap penalties
@en
P2093
P304
P3181
P356
10.1006/JMBI.2001.4762
P407
P50
P577
2001-06-29T00:00:00Z