Universal plant DNA barcode loci may not work in complex groups: a case study with Indian berberis species - sprookjes - yvandenbroek - TriplyDB

Universal plant DNA barcode loci may not work in complex groups: a case study with Indian berberis species

Universal plant DNA barcode loci may not work in complex groups: a case study with Indian berberis species

http://www.wikidata.org/entity/Q28748685

about

sameAs

rbcL and matK earn two thumbs up as the core DNA barcode for ferns Barcoding success as a function of phylogenetic relatedness in Viburnum, a clade of woody angiosperms Incorporating trnH-psbA to the core DNA barcodes improves significantly species discrimination within southern African Combretaceae Efficacy of the core DNA barcodes in identifying processed and poorly conserved plant materials commonly used in South African traditional medicine DNA barcoding as a complementary tool for conservation and valorisation of forest resources Development of a DNA barcoding system for seagrasses: successful but not simple The Use of DNA Barcoding on Recently Diverged Species in the Genus Gentiana (Gentianaceae) in China Integrating Biodiversity Data into Botanic Collections Colonization in North American Arid Lands: The Journey of Agarito (Berberis trifoliolata) Revealed by Multilocus Molecular Data and Packrat Midden Fossil Remains Efficient distinction of invasive aquatic plant species from non-invasive related species using DNA barcoding.Bamboo tea: reduction of taxonomic complexity and application of DNA diagnostics based on rbcL and matK sequence data Replacing Sanger with Next Generation Sequencing to improve coverage and quality of reference DNA barcodes for plants DNA barcoding evaluation and implications for phylogenetic relationships in Lauraceae from China.Berberis vulgaris: specifications and traditional uses Choosing and using a plant DNA barcode The loci recommended as universal barcodes for plants on the basis of floristic studies may not work with congeneric species as exemplified by DNA barcoding of Dendrobium species.Deciduous trees and the application of universal DNA barcodes: a case study on the circumpolar Fraxinus.DNA barcode authentication of wood samples of threatened and commercial timber trees within the tropical dry evergreen forest of India.Utility of the trnH-psbA intergenic spacer region and its combinations as plant DNA barcodes: a meta-analysis.A DNA barcoding method to discriminate between the model plant Brachypodium distachyon and its close relatives B. stacei and B. hybridum (Poaceae).The internal transcribed spacer (ITS) region and trnH-psbA [corrected] are suitable candidate loci for DNA barcoding of tropical tree species of India.DNA barcoding: complementing morphological identification of mosquito species in Singapore Predicting plastid marker variation: can complete plastid genomes from closely related species help?DNA barcoding the Canadian Arctic flora: core plastid barcodes (rbcL + matK) for 490 vascular plant species.Challenges to barcoding an entire flora.Refining the DNA barcode for land plants Application of DNA Barcodes in Asian Tropical Trees--A Case Study from Xishuangbanna Nature Reserve, Southwest China.DNA barcodes reveal microevolutionary signals in fire response trait in two legume genera.ITS and trnH-psbA as Efficient DNA Barcodes to Identify Threatened Commercial Woody Angiosperms from Southern Brazilian Atlantic Rainforests DNA barcoding the genus Chara: molecular evidence recovers fewer taxa than the classical morphological approach.Testing the Efficacy of DNA Barcodes for Identifying the Vascular Plants of Canada Evaluation of DNA barcodes in Codonopsis (Campanulaceae) and in some large angiosperm plant genera The first initiative of DNA barcoding of ornamental plants from Egypt and potential applications in horticulture industry.Genetic diversity and population structure of Arabidopsis thaliana along an altitudinal gradient Quality evaluation of ayurvedic crude drug daruharidra, its allied species, and commercial samples from herbal drug markets of India Evaluating five different loci (rbcL, rpoB, rpoC1, matK, and ITS) for DNA barcoding of Indian orchids.Testing the reliability of standard and complementary DNA barcodes for the monocot subfamily Alooideae from South Africa.DNA barcoding of perennial fruit tree species of agronomic interest in the genus Annona (Annonaceae).Barcoding the kingdom Plantae: new PCR primers for ITS regions of plants with improved universality and specificity.Potential DNA barcodes for Melilotus species based on five single loci and their combinations.

P2860

Q21134986-4EE15C59-EC5F-4E24-A75C-33647F9B8222 Q21284021-228740DE-EFD6-4E6A-A51A-09E51C480EF6 Q22679864-549CD833-8926-4983-A239-8F28A7DC7E44 Q22679866-5131802E-A8B8-4626-8F86-5756A1614BF0 Q22679872-81D6062B-D86D-4DF4-96FB-285EF853B23C Q28478847-51F41505-191D-4E97-B689-550482CAC801 Q28601103-0935FFB0-97E3-4168-BA08-839EC7296640 Q28601140-B2F75407-5288-411A-B3A1-41030BF45725 Q30000288-C17085AE-BF1F-400C-A411-1D5E7C6269D9 Q31102512-98A2D4CF-A167-466D-863E-20C094D1EB33 Q31148417-4876FC2A-295B-4024-A10E-A144E4B7926F Q33555594-A419222F-4353-4EE7-ACF7-9B69C909C1CF Q33570655-09B8D044-1D17-4820-9B88-DB420BC11C4F Q33819616-E77C1BF6-D0ED-47B2-88A2-7CDB28B7B8E5 Q33920783-73626F7E-F532-49DD-9F7C-53DE4D6335B4 Q34133366-7FB86F19-D540-46E7-862B-91F81E459B1E Q34222101-1BB38A2B-F958-4096-A84F-B62F679EA85B Q34258074-64407CF1-8F75-4F0F-8E60-E5733A01A33B Q34479107-6705344D-2EE2-4764-B37A-DE8205ABEFDF Q34512243-15A3F4C5-8D91-4B2F-A0B3-71F3255C88DD Q34608869-F36B9314-82E7-4507-BA57-71FFD68557E7 Q34808134-A644A5C7-012D-46B7-84B8-C41B1A7A250E Q35060882-2D1471A2-AA8C-4B9B-B9D9-035EA421ECAA Q35069283-E0873D7D-F0D0-4713-A5F8-27C06D7504E2 Q35165933-FC17D9DB-8ED2-4B6B-85AC-18F9C814409B Q35621278-609F2338-6AE7-4CB3-BD05-7156CA2CEA4B Q35677011-D9452F4C-3942-4BEF-9948-84410A5C2280 Q35823587-7334C29C-ED92-40F8-9B66-9AB07F9FF7DE Q35858929-59AA7AE9-0F10-4C50-8B58-B401078D8B47 Q35960941-0A6041D4-B752-4C8C-97B5-4CEABF71C02E Q36245420-BA44E8C2-F5E9-4F2F-A071-AD18D77AD79B Q36275130-B1ED7271-0777-4311-A0D2-32D84025C7C4 Q36281292-5C9CCDD0-8C86-4C89-83D8-67798EC7E02A Q36480331-8602E89C-AA62-4F1B-9172-B96F785458F8 Q36593027-AEE574AE-5C1A-4F62-A193-775FD65953F1 Q38780537-F2D075AD-923A-4C4C-B058-26D7445A598B Q38972081-1F43615B-E4CE-4378-8530-44B5BF6F499A Q40631224-62913D56-6110-4D3B-8097-7ECF2698612B Q40826087-5B8C5D29-7AD1-48DA-B0C9-FC3710942D02 Q41073688-CFD9C53F-4E26-4070-B612-D644388A74ED

P2860

Universal plant DNA barcode loci may not work in complex groups: a case study with Indian berberis species

http://www.wikidata.org/entity/Q28748685

description

2010 nî lūn-bûn

@nan

2010 թուականի Հոկտեմբերին հրատարակուած գիտական յօդուած

@hyw

2010 թվականի հոտեմբերին հրատարակված գիտական հոդված

@hy

2010年の論文

@ja

2010年論文

@yue

2010年論文

@zh-hant

2010年論文

@zh-hk

2010年論文

@zh-mo

2010年論文

@zh-tw

2010年论文

@wuu

name

Universal plant DNA barcode lo ...... y with Indian berberis species

@ast

Universal plant DNA barcode lo ...... y with Indian berberis species

@en

Universal plant DNA barcode lo ...... y with Indian berberis species

@nl

type

label

Universal plant DNA barcode lo ...... y with Indian berberis species

@ast

Universal plant DNA barcode lo ...... y with Indian berberis species

@en

Universal plant DNA barcode lo ...... y with Indian berberis species

@nl

prefLabel

Universal plant DNA barcode lo ...... y with Indian berberis species

@ast

Universal plant DNA barcode lo ...... y with Indian berberis species

@en

Universal plant DNA barcode lo ...... y with Indian berberis species

@nl

P1433

Q28748685-59F13CC1-8E70-4681-B6CE-7D359DF26353

P1476

Q28748685-CD585FEE-2521-4044-9C4E-1060812B3920

P2093

Q28748685-3528F61E-3E07-4970-A09F-F8F2CE69EF9C

Q28748685-425CB401-F887-4000-B4B3-41F905DF930F

Q28748685-47EBB823-12AC-4ED0-A58B-CEB8018AF045

Q28748685-5CA1EE3E-E8D6-4D2F-943A-641FDCB9781C

Q28748685-6989A551-4DFE-41B3-8592-AA4F42DCF832

Q28748685-74A38F42-7962-4634-A3C8-92F72800DFB3

Q28748685-7AAA15ED-56B3-49E8-9D88-DD5420221997

Q28748685-96D95243-9C07-4E6E-B75C-5579746F55B7

Q28748685-C6923ABB-458C-4A71-B4C3-9AF33AFFD569

Q28748685-F51554A2-B887-490D-8E7C-4CD62D93F690

P2860

Q28748685-01AEECC8-8779-4C73-9D9B-53090127560C

Q28748685-0B565E07-7CCA-4A8A-984E-7E8B6F67B55C

Q28748685-17E1964A-E92F-4EC2-BFB9-2953CBA2A235

Q28748685-185F1678-45FF-4736-9A64-A1D623E6EE80

Q28748685-1EFC92A6-F9D5-4CBB-88D2-B405DDD6DFCF

Q28748685-1FD7C47A-FA8B-45AD-A688-1AD68DE1D2DE

Q28748685-2FA685A3-4932-41F5-A8BE-1A2975722A20

Q28748685-3AC3EDBE-24DE-4E23-8861-652AD1F94E81

Q28748685-3D360909-EABA-4D76-AF57-9B126CD7B332

Q28748685-400035CD-16F5-4EA4-9DE5-BC0A6A7C58D3

P304

Q28748685-EE6B0E8D-221A-4FA1-9FA3-4FB2F924CFE5

P31

Q28748685-C02005DF-F3C0-4A22-BFD4-0C67E4D07834

P3181

Q28748685-AC01DA6A-B41B-454B-8BDA-843AA5E98208

P356

Q28748685-10BF9A53-06DB-419F-83C5-874CA0EA417B

P407

Q28748685-DB2830EC-EC60-4748-A460-E6CD8DDD739D

P433

Q28748685-8FEFC285-C342-455B-B8BA-2A2F04D3453C

P478

Q28748685-3F0E1DD4-73E1-4636-8173-F4827EA8E078

P50

Q28748685-63BE7363-DDBE-46D9-900A-A9D9C661D99C

Q28748685-DB250A09-6781-4FF4-BFE4-EEE618B33B12

P577

Q28748685-5473FECF-F796-492E-A49C-F7316367E55F

P5875

Q28748685-D16EEB8D-3E23-4C30-A3BF-9EAA571E195F

P698

Q28748685-FFE7188E-9E7F-406F-BE84-94CDACE81A4F

P921

Q28748685-A4E655AD-DE9B-43BA-B040-C8D387596E49

P932

Q28748685-65C98CD4-89EA-4EDE-93FC-FB78E8874540

P3181

P356

JOURNAL.PONE.0013674

P1433

P1476

Universal plant DNA barcode lo ...... y with Indian berberis species

@en

P2093

Anil Kumar

http://www.w3.org/2001/XMLSchema#string

Bhaskar Datt

http://www.w3.org/2001/XMLSchema#string

Lal Babu Chaudhary

http://www.w3.org/2001/XMLSchema#string

Narayanan K Nair

http://www.w3.org/2001/XMLSchema#string

Pradhyumna K Singh

http://www.w3.org/2001/XMLSchema#string

Rakesh Tuli

http://www.w3.org/2001/XMLSchema#string

Sribash Roy

http://www.w3.org/2001/XMLSchema#string

Tariq Husain

http://www.w3.org/2001/XMLSchema#string

Uma M Singh

http://www.w3.org/2001/XMLSchema#string

Virendra Shukla

http://www.w3.org/2001/XMLSchema#string

P2860

How many loci does it take to DNA barcode a crocus?

DNA barcoding: error rates based on comprehensive sampling.

Use of DNA barcodes to identify flowering plants

DNA barcoding the floras of biodiversity hotspots

A DNA barcode for land plants

Biological identifications through DNA barcodes

MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) Software Version 4.0

Power and limitations of the chloroplast trnL (UAA) intron for plant DNA barcoding

Toward a Rational Classification of Cultivated Plants

DNA barcoding Australia's fish species

P304

e13674

http://www.w3.org/2001/XMLSchema#string

P31

scholarly article

P3181

1459193

http://www.w3.org/2001/XMLSchema#string

P356

10.1371/JOURNAL.PONE.0013674

http://www.w3.org/2001/XMLSchema#string

P407

P433

10

http://www.w3.org/2001/XMLSchema#string

P478

5

http://www.w3.org/2001/XMLSchema#string

P50

Antariksh Tyagi

P577

2010-10-27T00:00:00Z

http://www.w3.org/2001/XMLSchema#dateTime

P5875

47718622

http://www.w3.org/2001/XMLSchema#string

P698

21060687

http://www.w3.org/2001/XMLSchema#string

P921

P932

2965122

http://www.w3.org/2001/XMLSchema#string