Structure-based prediction of DNA target sites by regulatory proteins.
about
Computational redesign of endonuclease DNA binding and cleavage specificityFrom sequence to structure and back again: approaches for predicting protein-DNA bindingQuantitative evaluation of protein-DNA interactions using an optimized knowledge-based potentialPosition specific variation in the rate of evolution in transcription factor binding sitesProtein-DNA binding specificity predictions with structural modelsAb initio prediction of transcription factor targets using structural knowledge.Quantitative analysis of EGR proteins binding to DNA: assessing additivity in both the binding site and the protein.Two arginine residues suppress the flexibility of nucleosomal DNA in the canonical nucleosome core3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structuresHOMCOS: an updated server to search and model complex 3D structuresInference of expanded Lrp-like feast/famine transcription factor targets in a non-model organism using protein structure-based predictionMining the entire Protein DataBank for frequent spatially cohesive amino acid patterns.Prediction of mono- and di-nucleotide-specific DNA-binding sites in proteins using neural networksExtensive protein and DNA backbone sampling improves structure-based specificity prediction for C2H2 zinc fingers.Predicting DNA-binding locations and orientation on proteins using knowledge-based learning of geometric properties.Identification of DNA-binding protein target sequences by physical effective energy functions: free energy analysis of lambda repressor-DNA complexes.Predicted transcription factor binding sites as predictors of operons in Escherichia coli and Streptomyces coelicolor.Protein-DNA interactions: the story so far and a new method for prediction.Insights into protein-DNA interactions through structure network analysisPrediction of TF target sites based on atomistic models of protein-DNA complexes.PDA: an automatic and comprehensive analysis program for protein-DNA complex structures.Predicting conformational ensembles and genome-wide transcription factor binding sites from DNA sequences.An efficient algorithm for improving structure-based prediction of transcription factor binding sitesThree enhancements to the inference of statistical protein-DNA potentials.Improved modeling of side-chain--base interactions and plasticity in protein--DNA interface designA structural-based strategy for recognition of transcription factor binding sites.Additivity in protein-DNA interactions: how good an approximation is it?An overview of the prediction of protein DNA-binding sitesA Large-Scale Assessment of Nucleic Acids Binding Site Prediction Programs.An information transmission model for transcription factor binding at regulatory DNA sites.Computational identification of transcriptional regulatory elements in DNA sequence.Bullied no more: when and how DNA shoves proteins around.PiDNA: Predicting protein-DNA interactions with structural modelsNovel approach for selecting the best predictor for identifying the binding sites in DNA binding proteins.Onco-Regulon: an integrated database and software suite for site specific targeting of transcription factors of cancer genes.Assessment of the optimization of affinity and specificity at protein-DNA interfacesGenome-wide de novo prediction of cis-regulatory binding sites in prokaryotes.Recent computational approaches to understand gene regulation: mining gene regulation in silico.Experimentally based contact energies decode interactions responsible for protein-DNA affinity and the role of molecular waters at the binding interfaceQuantitative modeling of DNA-protein interactions: effects of amino acid substitutions on binding specificity of the Mnt repressor
P2860
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P2860
Structure-based prediction of DNA target sites by regulatory proteins.
description
1999 nî lūn-bûn
@nan
1999 թուականի Ապրիլին հրատարակուած գիտական յօդուած
@hyw
1999 թվականի ապրիլին հրատարակված գիտական հոդված
@hy
1999年の論文
@ja
1999年論文
@yue
1999年論文
@zh-hant
1999年論文
@zh-hk
1999年論文
@zh-mo
1999年論文
@zh-tw
1999年论文
@wuu
name
Structure-based prediction of DNA target sites by regulatory proteins.
@ast
Structure-based prediction of DNA target sites by regulatory proteins.
@en
type
label
Structure-based prediction of DNA target sites by regulatory proteins.
@ast
Structure-based prediction of DNA target sites by regulatory proteins.
@en
prefLabel
Structure-based prediction of DNA target sites by regulatory proteins.
@ast
Structure-based prediction of DNA target sites by regulatory proteins.
@en
P1433
P1476
Structure-based prediction of DNA target sites by regulatory proteins.
@en
P304
P356
10.1002/(SICI)1097-0134(19990401)35:1<114::AID-PROT11>3.3.CO;2-K
P407
P577
1999-04-01T00:00:00Z