Exploring global motions and correlations in the ribosome.
about
Dependency map of proteins in the small ribosomal subunit.Steric interactions lead to collective tilting motion in the ribosome during mRNA-tRNA translocationConnecting the kinetics and energy landscape of tRNA translocation on the ribosomeSimulating movement of tRNA into the ribosome during decoding.REACH coarse-grained normal mode analysis of protein dimer interaction dynamics.Ribosome Mechanics Informs about Mechanism.ClustENM: ENM-Based Sampling of Essential Conformational Space at Full Atomic Resolution.Molecular simulations of cotranslational protein folding: fragment stabilities, folding cooperativity, and trapping in the ribosome.Effects of Restrained Sampling Space and Nonplanar Amino Groups on Free-Energy Predictions for RNA with Imino and Sheared Tandem GA Base Pairs Flanked by GC, CG, iGiC or iCiG Base PairsThe ribosome's energy landscape: Recent insights from computationNon-bulk-like solvent behavior in the ribosome exit tunnel.Accommodation of aminoacyl-tRNA into the ribosome involves reversible excursions along multiple pathways.A-site residues move independently from P-site residues in all-atom molecular dynamics simulations of the 70S bacterial ribosome.A computational investigation on the connection between dynamics properties of ribosomal proteins and ribosome assemblyGated binding of ligands to HIV-1 protease: Brownian dynamics simulations in a coarse-grained model.Characterization of a clinical polymer-drug conjugate using multiscale modeling.RedMDStream: Parameterization and Simulation Toolbox for Coarse-Grained Molecular Dynamics ModelsCoarse-grained molecular dynamics simulations of a rotating bacterial flagellumUnwrapping of nucleosomal DNA ends: a multiscale molecular dynamics studyHigh performance computing in biology: multimillion atom simulations of nanoscale systemsElastic properties of ribosomal RNA building blocks: molecular dynamics of the GTPase-associated center rRNAA study of collective atomic fluctuations and cooperativity in the U1A-RNA complex based on molecular dynamics simulations.Molecular dynamics simulations of RNA: an in silico single molecule approach.Mechanisms of SecM-mediated stalling in the ribosomeCoarse-grained biomolecular simulation with REACH: realistic extension algorithm via covariance Hessian.Dynamics of the acetylcholinesterase tetramer.REACH coarse-grained biomolecular simulation: transferability between different protein structural classes.Key intermolecular interactions in the E. coli 70S ribosome revealed by coarse-grained analysis.Computational studies of molecular machines: the ribosome.Biomolecular dynamics: order-disorder transitions and energy landscapesCoarse-graining RNA nanostructures for molecular dynamics simulations.Structural dynamics of the ribosome.Focused functional dynamics of supramolecules by use of a mixed-resolution elastic network model.Multistart simulated annealing refinement of the crystal structure of the 70S ribosome.The fluctuating ribosome: thermal molecular dynamics characterized by neutron scattering.Simulating activity of the bacterial ribosome.Minimalist models for proteins: a comparative analysis.Analysis of ribosomal inter-subunit sites as targets for complementary oligonucleotides.Coarse-grained modeling study of nonpeptide RGD ligand density and PEG molecular weight on the conformation of poly(γ-glutamyl-glutamate) paclitaxel conjugates.Perturbation of the tRNA tertiary core differentially affects specific steps of the elongation cycle.
P2860
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P2860
Exploring global motions and correlations in the ribosome.
description
2005 nî lūn-bûn
@nan
2005 թուականի Յունիսին հրատարակուած գիտական յօդուած
@hyw
2005 թվականի հունիսին հրատարակված գիտական հոդված
@hy
2005年の論文
@ja
2005年論文
@yue
2005年論文
@zh-hant
2005年論文
@zh-hk
2005年論文
@zh-mo
2005年論文
@zh-tw
2005年论文
@wuu
name
Exploring global motions and correlations in the ribosome.
@ast
Exploring global motions and correlations in the ribosome.
@en
type
label
Exploring global motions and correlations in the ribosome.
@ast
Exploring global motions and correlations in the ribosome.
@en
prefLabel
Exploring global motions and correlations in the ribosome.
@ast
Exploring global motions and correlations in the ribosome.
@en
P2860
P50
P1433
P1476
Exploring global motions and correlations in the ribosome.
@en
P2860
P304
P356
10.1529/BIOPHYSJ.104.058495
P407
P577
2005-06-10T00:00:00Z