about
Best practices for evaluating single nucleotide variant calling methods for microbial genomicsChallenges and opportunities in understanding microbial communities with metagenome assembly (accompanied by IPython Notebook tutorial)Drug resistance analysis by next generation sequencing in LeishmaniaAdvanced Applications of RNA Sequencing and ChallengesThe NGS WikiBook: a dynamic collaborative online training effort with long-term sustainabilityGenotyping by sequencing approaches to characterise crop genomes: choosing the right tool for the right applicationEmerging applications of read profiles towards the functional annotation of the genomeNextGenMap: fast and accurate read mapping in highly polymorphic genomesMaxSSmap: a GPU program for mapping divergent short reads to genomes with the maximum scoring subsequenceComparison of mapping algorithms used in high-throughput sequencing: application to Ion Torrent data.Systematic evaluation of spliced alignment programs for RNA-seq dataMeta-QC-Chain: comprehensive and fast quality control method for metagenomic data.Performance comparison of SNP detection tools with illumina exome sequencing data--an assessment using both family pedigree information and sample-matched SNP array dataCADBURE: A generic tool to evaluate the performance of spliced aligners on RNA-Seq data.Characterizing and annotating the genome using RNA-seq data.Next Generation Sequencing Data and Proteogenomics.From next-generation resequencing reads to a high-quality variant data set.Short Read Mapping: An Algorithmic Tour.Transcriptomics technologies.mrsFAST-Ultra: a compact, SNP-aware mapper for high performance sequencing applications.Detecting and characterizing circular RNAs.High-Throughput Sequencing, a VersatileWeapon to Support Genome-Based Diagnosis in Infectious Diseases: Applications to Clinical BacteriologyThe challenges of delivering bioinformatics training in the analysis of high-throughput data.A random-permutations-based approach to fast read alignmentBenchmarking short sequence mapping toolsImpact of RNA-seq attributes on false positive rates in differential expression analysis of de novo assembled transcriptomesDiscovery of protein interactions using parallel analysis of translated ORFs (PLATO).Blind spots of quantitative RNA-seq: the limits for assessing abundance, differential expression, and isoform switchingFANSe2: a robust and cost-efficient alignment tool for quantitative next-generation sequencing applicationsAn analytical framework for optimizing variant discovery from personal genomes.RNA-Seq gene profiling--a systematic empirical comparison.Computational challenges, tools, and resources for analyzing co- and post-transcriptional events in high throughput.Verification and validation of bioinformatics software without a gold standard: a case study of BWA and Bowtie.RNA-Seq: Improving Our Understanding of Retinal Biology and Disease.A next generation semiconductor based sequencing approach for the identification of meat species in DNA mixtures.The road from next-generation sequencing to personalized medicine.A parallel and sensitive software tool for methylation analysis on multicore platforms.One Size Doesn't Fit All - RefEditor: Building Personalized Diploid Reference Genome to Improve Read Mapping and Genotype Calling in Next Generation Sequencing Studies.Challenges in exome analysis by LifeScope and its alternative computational pipelines.Teaser: Individualized benchmarking and optimization of read mapping results for NGS data.
P2860
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P2860
description
2012 nî lūn-bûn
@nan
2012 թուականի Հոկտեմբերին հրատարակուած գիտական յօդուած
@hyw
2012 թվականի հոտեմբերին հրատարակված գիտական հոդված
@hy
2012年の論文
@ja
2012年学术文章
@wuu
2012年学术文章
@zh-cn
2012年学术文章
@zh-hans
2012年学术文章
@zh-my
2012年学术文章
@zh-sg
2012年學術文章
@yue
name
Tools for mapping high-throughput sequencing data.
@ast
Tools for mapping high-throughput sequencing data.
@en
type
label
Tools for mapping high-throughput sequencing data.
@ast
Tools for mapping high-throughput sequencing data.
@en
prefLabel
Tools for mapping high-throughput sequencing data.
@ast
Tools for mapping high-throughput sequencing data.
@en
P2860
P50
P356
P1433
P1476
Tools for mapping high-throughput sequencing data.
@en
P2093
Johan Rung
P2860
P304
P356
10.1093/BIOINFORMATICS/BTS605
P407
P577
2012-10-11T00:00:00Z