Toward genomic prediction from whole-genome sequence data: impact of sequencing design on genotype imputation and accuracy of predictions.
about
Genomic relationships computed from either next-generation sequence or array SNP data.Accuracy of imputation to whole-genome sequence data in Holstein Friesian cattle.The effects of demography and long-term selection on the accuracy of genomic prediction with sequence data.The effect of rare alleles on estimated genomic relationships from whole genome sequence data.Fast imputation using medium or low-coverage sequence data.Genomic prediction using imputed whole-genome sequence data in Holstein Friesian cattleComparison among three variant callers and assessment of the accuracy of imputation from SNP array data to whole-genome sequence level in chicken.Accuracy of genomic prediction using imputed whole-genome sequence data in white layers.Efficient genomic prediction based on whole-genome sequence data using split-and-merge Bayesian variable selection.Genomic prediction using preselected DNA variants from a GWAS with whole-genome sequence data in Holstein-Friesian cattle.Identification of key contributors in complex population structures.A strategy to improve phasing of whole-genome sequenced individuals through integration of familial information from dense genotype panels.Genome-Based Identification of Heterotic Patterns in Rice.hsphase: an R package for pedigree reconstruction, detection of recombination events, phasing and imputation of half-sib family groupsConsequences of splitting whole-genome sequencing effort over multiple breeds on imputation accuracy.Prospects and limits of marker imputation in quantitative genetic studies in European elite wheat (Triticum aestivum L.).Accuracy of imputation using the most common sires as reference population in layer chickens.Rare Variants in Transcript and Potential Regulatory Regions Explain a Small Percentage of the Missing Heritability of Complex Traits in Cattle.Inexpensive Computation of the Inverse of the Genomic Relationship Matrix in Populations with Small Effective Population Size.Sequence-based Association Analysis Reveals an MGST1 eQTL with Pleiotropic Effects on Bovine Milk CompositionUsing Sequence Variants in Linkage Disequilibrium with Causative Mutations to Improve Across-Breed Prediction in Dairy Cattle: A Simulation Study.Contributions of linkage disequilibrium and co-segregation information to the accuracy of genomic prediction.Whole-genome sequence-based genomic prediction in laying chickens with different genomic relationship matrices to account for genetic architecture.Predictive performance of genomic selection methods for carcass traits in Hanwoo beef cattle: impacts of the genetic architecture.Selecting sequence variants to improve genomic predictions for dairy cattleWithin- and across-breed genomic prediction using whole-genome sequence and single nucleotide polymorphism panels.Application of a Bayesian non-linear model hybrid scheme to sequence data for genomic prediction and QTL mapping.A method for the allocation of sequencing resources in genotyped livestock populations.A combined coalescence gene-dropping tool for evaluating genomic selection in complex scenarios (ms2gs).Identification of QTL on Chromosome 18 Associated with Non-Coagulating Milk in Swedish Red Cows.Sequence- vs. chip-assisted genomic selection: accurate biological information is advised.Potential of genotyping-by-sequencing for genomic selection in livestock populations.A method for allocating low-coverage sequencing resources by targeting haplotypes rather than individualsSpecial issues on advances in quantitative genetics: introduction.Prioritizing animals for dense genotyping in order to impute missing genotypes of sparsely genotyped animals.Whole genomic prediction of growth and carcass traits in a Chinese quality chicken population.Highly accurate sequence imputation enables precise QTL mapping in Brown Swiss cattle.Novel methods for genotype imputation to whole-genome sequence and a simple linear model to predict imputation accuracy.Exome sequence genotype imputation in globally diverse hexaploid wheat accessions.Imputation from SNP chip to sequence: a case study in a Chinese indigenous chicken population.
P2860
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P2860
Toward genomic prediction from whole-genome sequence data: impact of sequencing design on genotype imputation and accuracy of predictions.
description
2013 nî lūn-bûn
@nan
2013 թուականի Ապրիլին հրատարակուած գիտական յօդուած
@hyw
2013 թվականի ապրիլին հրատարակված գիտական հոդված
@hy
2013年の論文
@ja
2013年論文
@yue
2013年論文
@zh-hant
2013年論文
@zh-hk
2013年論文
@zh-mo
2013年論文
@zh-tw
2013年论文
@wuu
name
Toward genomic prediction from ...... n and accuracy of predictions.
@ast
Toward genomic prediction from ...... n and accuracy of predictions.
@en
type
label
Toward genomic prediction from ...... n and accuracy of predictions.
@ast
Toward genomic prediction from ...... n and accuracy of predictions.
@en
prefLabel
Toward genomic prediction from ...... n and accuracy of predictions.
@ast
Toward genomic prediction from ...... n and accuracy of predictions.
@en
P2860
P356
P1433
P1476
Toward genomic prediction from ...... on and accuracy of predictions
@en
P2093
I M Macleod
P2860
P2888
P356
10.1038/HDY.2013.13
P407
P577
2013-04-03T00:00:00Z
P5875
P6179
1013905892