Identification of mutations in laboratory-evolved microbes from next-generation sequencing data using breseq.
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Microscale insights into pneumococcal antibiotic mutant selection windowsStructure, Bioactivity, and Resistance Mechanism of Streptomonomicin, an Unusual Lasso Peptide from an Understudied Halophilic ActinomyceteEvolution of E. coli on [U-13C]Glucose Reveals a Negligible Isotopic Influence on Metabolism and PhysiologyGenome sequences of two closely related strains of Escherichia coli K-12 GM4792Fitness Trade-Offs Determine the Role of the Molecular Chaperonin GroEL in Buffering MutationsThe molecular chaperone DnaK is a source of mutational robustnessIdentifying structural variation in haploid microbial genomes from short-read resequencing data using breseq.Genomewide Mutational Diversity in Escherichia coli Population Evolving in Prolonged Stationary Phase.Host-selected mutations converging on a global regulator drive an adaptive leap towards symbiosis in bacteria.Time-programmable drug dosing allows the manipulation, suppression and reversal of antibiotic drug resistance in vitroA Gapless, Unambiguous Genome Sequence of the Enterohemorrhagic Escherichia coli O157:H7 Strain EDL933.Experimental Evolution of Metabolic Dependency in Bacteria.Fine-tuning citrate synthase flux potentiates and refines metabolic innovation in the Lenski evolution experiment.Tempo and mode of genome evolution in a 50,000-generation experiment.Ecological speciation of bacteriophage lambda in allopatry and sympatry.Genomic analysis reveals distinct concentration-dependent evolutionary trajectories for antibiotic resistance in Escherichia coli.Mutations in global regulators lead to metabolic selection during adaptation to complex environments.Effective use of a horizontally-transferred pathway for dichloromethane catabolism requires post-transfer refinement.Use of adaptive laboratory evolution to discover key mutations enabling rapid growth of Escherichia coli K-12 MG1655 on glucose minimal mediumThe genome-scale interplay amongst xenogene silencing, stress response and chromosome architecture in Escherichia coli.Detecting rare structural variation in evolving microbial populations from new sequence junctions using breseqGenome instability mediates the loss of key traits by Acinetobacter baylyi ADP1 during laboratory evolution.Rapid evolution of silver nanoparticle resistance in Escherichia coli.The Molecular and Genetic Basis of Repeatable Coevolution between Escherichia coli and Bacteriophage T3 in a Laboratory Microcosm.Virus-induced dormancy in the archaeon Sulfolobus islandicus.A tortoise-hare pattern seen in adapting structured and unstructured populations suggests a rugged fitness landscape in bacteriaAcinetobacter baumannii Repeatedly Evolves a Hypermutator Phenotype in Response to Tigecycline That Effectively Surveys Evolutionary Trajectories to ResistanceTransient overexpression of DNA adenine methylase enables efficient and mobile genome engineering with reduced off-target effects.Multifactorial Competition and Resistance in a Two-Species Bacterial System.Complete Genome Sequence of Escherichia coli NCM3722Genomic Signatures of Experimental Adaptation to Antimicrobial Peptides in Staphylococcus aureusCell-Size Homeostasis and the Incremental Rule in a Bacterial Pathogen.Whole-Genome Comparison Uncovers Genomic Mutations between Group B Streptococci Sampled from Infected Newborns and Their Mothers.Anaerobically Grown Escherichia coli Has an Enhanced Mutation Rate and Distinct Mutational Spectra.Metabolite toxicity determines the pace of molecular evolution within microbial populationsThe genetic architecture of low-temperature adaptation in the wine yeast Saccharomyces cerevisiaeExperimental Evolution of Escherichia coli Harboring an Ancient Translation ProteinHopanoid-free Methylobacterium extorquens DM4 overproduces carotenoids and has widespread growth impairment.Rampant Parasexuality Evolves in a Hospital Pathogen during Antibiotic Selection.Adaptation to Parasites and Costs of Parasite Resistance in Mutator and Nonmutator Bacteria.
P2860
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P2860
Identification of mutations in laboratory-evolved microbes from next-generation sequencing data using breseq.
description
2014 nî lūn-bûn
@nan
2014 թուականի Յունուարին հրատարակուած գիտական յօդուած
@hyw
2014 թվականի հունվարին հրատարակված գիտական հոդված
@hy
2014年の論文
@ja
2014年論文
@yue
2014年論文
@zh-hant
2014年論文
@zh-hk
2014年論文
@zh-mo
2014年論文
@zh-tw
2014年论文
@wuu
name
Identification of mutations in ...... sequencing data using breseq.
@ast
Identification of mutations in ...... sequencing data using breseq.
@en
type
label
Identification of mutations in ...... sequencing data using breseq.
@ast
Identification of mutations in ...... sequencing data using breseq.
@en
prefLabel
Identification of mutations in ...... sequencing data using breseq.
@ast
Identification of mutations in ...... sequencing data using breseq.
@en
P2860
P1476
Identification of mutations in ...... sequencing data using breseq.
@en
P2093
Daniel E Deatherage
Jeffrey E Barrick
P2860
P304
P356
10.1007/978-1-4939-0554-6_12
P407
P577
2014-01-01T00:00:00Z