LOOS: an extensible platform for the structural analysis of simulations.
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Characterization of a potent antimicrobial lipopeptide via coarse-grained molecular dynamics.Structure-based simulations reveal concerted dynamics of GPCR activationRetinal ligand mobility explains internal hydration and reconciles active rhodopsin structuresα-Tocopherol Is Well Designed to Protect Polyunsaturated Phospholipids: MD Simulations.Simulating the mechanism of antimicrobial lipopeptides with all-atom molecular dynamics.Coarse-grained molecular dynamics provides insight into the interactions of lipids and cholesterol with rhodopsin.Lipid concentration and molar ratio boundaries for the use of isotropic bicellesMembrane binding of an acyl-lactoferricin B antimicrobial peptide from solid-state NMR experiments and molecular dynamics simulations.MDAnalysis: a toolkit for the analysis of molecular dynamics simulations.Structural basis of G protein-coupled receptor-Gi protein interaction: formation of the cannabinoid CB2 receptor-Gi protein complexInfluence of Sequence and Covalent Modifications on Yeast tRNA Dynamics.JGromacs: a Java package for analyzing protein simulations.Molecular Mechanics Investigation of an Adenine-Adenine Non-Canonical Pair Conformational ChangeAutomated RNA tertiary structure prediction from secondary structure and low-resolution restraints.MDTraj: A Modern Open Library for the Analysis of Molecular Dynamics Trajectories.Agonist dynamics and conformational selection during microsecond simulations of the A(2A) adenosine receptorElastic Network Models are Robust to Variations in FormalismMolecular Basis of S100A1 Activation at Saturating and Subsaturating Calcium Concentrations.Interactions between fengycin and model bilayers quantified by coarse-grained molecular dynamics.Probing the disparate effects of arginine and lysine residues on antimicrobial peptide/bilayer association.The interplay of structure and dynamics: insights from a survey of HIV-1 reverse transcriptase crystal structures.Open and closed conformations of the isolated transmembrane domain of death receptor 5 support a new model of activation.Molecular dynamics simulations on the Tre1 G protein-coupled receptor: exploring the role of the arginine of the NRY motif in Tre1 structure.Concerted interconversion between ionic lock substates of the beta(2) adrenergic receptor revealed by microsecond timescale molecular dynamics.Death Receptor 5 Activation Is Energetically Coupled to Opening of the Transmembrane Domain Dimer.Selectivity and Mechanism of Fengycin, an Antimicrobial Lipopeptide from Molecular Dynamics.PyContact: Rapid, Customizable, and Visual Analysis of Noncovalent Interactions in MD Simulations.Interaction of Artepillin C with model membranes.
P2860
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P2860
LOOS: an extensible platform for the structural analysis of simulations.
description
2009 nî lūn-bûn
@nan
2009 թուականի Յունուարին հրատարակուած գիտական յօդուած
@hyw
2009 թվականի հունվարին հրատարակված գիտական հոդված
@hy
2009年の論文
@ja
2009年論文
@yue
2009年論文
@zh-hant
2009年論文
@zh-hk
2009年論文
@zh-mo
2009年論文
@zh-tw
2009年论文
@wuu
name
LOOS: an extensible platform for the structural analysis of simulations.
@ast
LOOS: an extensible platform for the structural analysis of simulations.
@en
type
label
LOOS: an extensible platform for the structural analysis of simulations.
@ast
LOOS: an extensible platform for the structural analysis of simulations.
@en
prefLabel
LOOS: an extensible platform for the structural analysis of simulations.
@ast
LOOS: an extensible platform for the structural analysis of simulations.
@en
P1476
LOOS: an extensible platform for the structural analysis of simulations
@en
P2093
Tod D Romo
P304
P356
10.1109/IEMBS.2009.5335065
P407
P577
2009-01-01T00:00:00Z