An improved method for scoring protein-protein interactions using semantic similarity within the gene ontology.
about
Predicting physiologically relevant SH3 domain mediated protein-protein interactions in yeast.Domain-mediated protein interaction prediction: From genome to network.M-Finder: Uncovering functionally associated proteins from interactome data integrated with GO annotations.PSEA-Quant: a protein set enrichment analysis on label-free and label-based protein quantification data.Spotlite: web application and augmented algorithms for predicting co-complexed proteins from affinity purification--mass spectrometry data.CASCADE_SCAN: mining signal transduction network from high-throughput data based on steepest descent method.An integrative approach to inferring biologically meaningful gene modules.Semantic similarity analysis of protein data: assessment with biological features and issues.SignaLink 2 - a signaling pathway resource with multi-layered regulatory networksMapping the cellular response to small molecules using chemogenomic fitness signatures.Improving the measurement of semantic similarity between gene ontology terms and gene products: insights from an edge- and IC-based hybrid methodDaGO-Fun: tool for Gene Ontology-based functional analysis using term information content measures.Comparison of human cell signaling pathway databases--evolution, drawbacks and challenges.ppiPre: predicting protein-protein interactions by combining heterogeneous features.Computational prediction of the human-microbial oral interactome.GreedyPlus: An Algorithm for the Alignment of Interface Interaction Networks.A topology-based metric for measuring term similarity in the gene ontology.SGFSC: speeding the gene functional similarity calculation based on hash tablesAn improved method for functional similarity analysis of genes based on Gene Ontology.The effects of shared information on semantic calculations in the gene ontology.Extracting microRNA-gene relations from biomedical literature using distant supervision.Identification of salt treated proteins in sorghum using gene ontology linkage.Using contrast patterns between true complexes and random subgraphs in PPI networks to predict unknown protein complexes.Information content-based gene ontology semantic similarity approaches: toward a unified framework theoryProteomic profile of Cryptococcus neoformans biofilm reveals changes in metabolic processes.Exploring Approaches for Detecting Protein Functional Similarity within an Orthology-based Framework.Semantic Similarity in the Gene Ontology.Gene Ontology semantic similarity tools: survey on features and challenges for biological knowledge discovery.simDEF: definition-based semantic similarity measure of gene ontology terms for functional similarity analysis of genes.Distance-wise pathway discovery from protein-protein interaction networks weighted by semantic similarity.Survey: Enhancing protein complex prediction in PPI networks with GO similarity weighting.Measuring gene functional similarity based on group-wise comparison of GO terms.Identification of MFS proteins in sorghum using semantic similarity.Improving GO semantic similarity measures by exploring the ontology beneath the terms and modelling uncertainty.Identification of drought responsive proteins using gene ontology hierarchy.Networks of ProteinProtein Interactions: From Uncertainty to Molecular Details.Evolutionary analysis and interaction prediction for protein-protein interaction network in geometric spaceBIPS: BIANA Interolog Prediction Server. A tool for protein-protein interaction inference.Prediction and comparison of Salmonella-human and Salmonella-Arabidopsis interactomesReview of computational methods for virus-host protein interaction prediction: a case study on novel Ebola-human interactions.
P2860
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P2860
An improved method for scoring protein-protein interactions using semantic similarity within the gene ontology.
description
2010 nî lūn-bûn
@nan
2010 թուականի Նոյեմբերին հրատարակուած գիտական յօդուած
@hyw
2010 թվականի նոյեմբերին հրատարակված գիտական հոդված
@hy
2010年の論文
@ja
2010年論文
@yue
2010年論文
@zh-hant
2010年論文
@zh-hk
2010年論文
@zh-mo
2010年論文
@zh-tw
2010年论文
@wuu
name
An improved method for scoring ...... rity within the gene ontology.
@ast
An improved method for scoring ...... rity within the gene ontology.
@en
type
label
An improved method for scoring ...... rity within the gene ontology.
@ast
An improved method for scoring ...... rity within the gene ontology.
@en
prefLabel
An improved method for scoring ...... rity within the gene ontology.
@ast
An improved method for scoring ...... rity within the gene ontology.
@en
P2860
P356
P1433
P1476
An improved method for scoring ...... rity within the gene ontology.
@en
P2093
Shobhit Jain
P2860
P2888
P356
10.1186/1471-2105-11-562
P577
2010-11-15T00:00:00Z
P5875
P6179
1013237406