An integrated pipeline for the genome-wide analysis of transcription factor binding sites from ChIP-Seq.
about
Arabidopsis circadian clock protein, TOC1, is a DNA-binding transcription factorQuantitative analysis of ChIP-seq data uncovers dynamic and sustained H3K4me3 and H3K27me3 modulation in cancer cells under hypoxiaExploring the transcription factor activity in high-throughput gene expression data using RLQ analysisHiChIP: a high-throughput pipeline for integrative analysis of ChIP-Seq data.TCGA Workflow: Analyze cancer genomics and epigenomics data using Bioconductor packagesFish the ChIPs: a pipeline for automated genomic annotation of ChIP-Seq data.A complete workflow for the analysis of full-size ChIP-seq (and similar) data sets using peak-motifs.Differential effects of STAT proteins on growth hormone-mediated IGF-I gene expression.Reusable, extensible, and modifiable R scripts and Kepler workflows for comprehensive single set ChIP-seq analysis.Evaluating tools for transcription factor binding site prediction.An algorithmic perspective of de novo cis-regulatory motif finding based on ChIP-seq data.A GWAS sequence variant for platelet volume marks an alternative DNM3 promoter in megakaryocytes near a MEIS1 binding siteMotif discovery and transcription factor binding sites before and after the next-generation sequencing era.Patterns of regulatory activity across diverse human cell types predict tissue identity, transcription factor binding, and long-range interactions.DNA methylation contributes to natural human variationShifting transcriptional machinery is required for long-term memory maintenance and modification in Drosophila mushroom bodies.Jmjd3-Mediated H3K27me3 Dynamics Orchestrate Brown Fat Development and Regulate White Fat PlasticityIntegrated analysis of motif activity and gene expression changes of transcription factors.Modular discovery of monomeric and dimeric transcription factor binding motifs for large data sets.Maser: one-stop platform for NGS big data from analysis to visualization.Systems and Synthetic Biology Approaches to Engineer Fungi for Fine Chemical Production
P2860
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P2860
An integrated pipeline for the genome-wide analysis of transcription factor binding sites from ChIP-Seq.
description
2011 nî lūn-bûn
@nan
2011 թուականի Փետրուարին հրատարակուած գիտական յօդուած
@hyw
2011 թվականի փետրվարին հրատարակված գիտական հոդված
@hy
2011年の論文
@ja
2011年論文
@yue
2011年論文
@zh-hant
2011年論文
@zh-hk
2011年論文
@zh-mo
2011年論文
@zh-tw
2011年论文
@wuu
name
An integrated pipeline for the ...... r binding sites from ChIP-Seq.
@ast
An integrated pipeline for the ...... r binding sites from ChIP-Seq.
@en
type
label
An integrated pipeline for the ...... r binding sites from ChIP-Seq.
@ast
An integrated pipeline for the ...... r binding sites from ChIP-Seq.
@en
prefLabel
An integrated pipeline for the ...... r binding sites from ChIP-Seq.
@ast
An integrated pipeline for the ...... r binding sites from ChIP-Seq.
@en
P2093
P2860
P1433
P1476
An integrated pipeline for the ...... or binding sites from ChIP-Seq
@en
P2093
Arnaud Droit
Eloi Mercier
Gordon Robertson
Raphael Gottardo
P2860
P304
P356
10.1371/JOURNAL.PONE.0016432
P407
P577
2011-02-16T00:00:00Z