Metabolic flux responses to pyruvate kinase knockout in Escherichia coli - sprookjes - yvandenbroek - TriplyDB

Metabolic flux responses to pyruvate kinase knockout in Escherichia coli

Metabolic flux responses to pyruvate kinase knockout in Escherichia coli

http://www.wikidata.org/entity/Q34104879

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Highly nonrandom features of synaptic connectivity in local cortical circuits.Warburg effect and translocation-induced genomic instability: two yeast models for cancer cells FiatFlux--a software for metabolic flux analysis from 13C-glucose experiments Analysis of optimality in natural and perturbed metabolic networks Spontaneous reaction silencing in metabolic optimization Advances in structure elucidation of small molecules using mass spectrometry Regulatory on/off minimization of metabolic flux changes after genetic perturbations Predicting biological system objectives de novo from internal state measurements.Systematic evaluation of objective functions for predicting intracellular fluxes in Escherichia coli A Network Biology Approach to Decipher Stress Response in Bacteria Using Escherichia coli As a Model.Integration of omics data: how well does it work for bacteria?anNET: a tool for network-embedded thermodynamic analysis of quantitative metabolome data.Including metabolite concentrations into flux balance analysis: thermodynamic realizability as a constraint on flux distributions in metabolic networks Co-regulation of metabolic genes is better explained by flux coupling than by network distance.A systematic investigation of Escherichia coli central carbon metabolism in response to superoxide stress Evolutionary dynamics from a variational principle.Effect of iclR and arcA knockouts on biomass formation and metabolic fluxes in Escherichia coli K12 and its implications on understanding the metabolism of Escherichia coli BL21 (DE3).Decrease of energy spilling in Escherichia coli continuous cultures with rising specific growth rate and carbon wasting Dynamic regulatory on/off minimization for biological systems under internal temporal perturbations.Pyruvate kinase triggers a metabolic feedback loop that controls redox metabolism in respiring cells A global investigation of the Bacillus subtilis iron-sparing response identifies major changes in metabolism.The soluble and membrane-bound transhydrogenases UdhA and PntAB have divergent functions in NADPH metabolism of Escherichia coli.Metabolic regulation analysis of wild-type and arcA mutant Escherichia coli under nitrate conditions using different levels of omics data.Fluxomics: mass spectrometry versus quantitative imaging.The pyruvate-tricarboxylic acid cycle node: a focal point of virulence control in the enteric pathogen Yersinia pseudotuberculosis.Dispensability of Escherichia coli's latent pathways.The ability of flux balance analysis to predict evolution of central metabolism scales with the initial distance to the optimum.NMR-based stable isotope resolved metabolomics in systems biochemistry.Segmented flow is controlling growth of catalytic biofilms in continuous multiphase microreactors.Fluxome study of Pseudomonas fluorescens reveals major reorganisation of carbon flux through central metabolic pathways in response to inactivation of the anti-sigma factor MucA.Metabolic networks in motion: 13C-based flux analysis Scaling theory of transport in complex biological networks SUMOFLUX: A Generalized Method for Targeted 13C Metabolic Flux Ratio Analysis The PEP-pyruvate-oxaloacetate node as the switch point for carbon flux distribution in bacteria.Parasites lead to evolution of robustness against gene loss in host signaling networks.Identifying essential genes in Escherichia coli from a metabolic optimization principle Pyruvate kinase-deficient Escherichia coli exhibits increased plasmid copy number and cyclic AMP levels.Factors affecting plasmid production in Escherichia coli from a resource allocation standpoint.Metabolic flux analysis of Escherichia coli creB and arcA mutants reveals shared control of carbon catabolism under microaerobic growth conditions.Inhibition of triosephosphate isomerase by phosphoenolpyruvate in the feedback-regulation of glycolysis.

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Metabolic flux responses to pyruvate kinase knockout in Escherichia coli

http://www.wikidata.org/entity/Q34104879

description

2002 nî lūn-bûn

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2002 թուականի Յունուարին հրատարակուած գիտական յօդուած

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2002 թվականի հունվարին հրատարակված գիտական հոդված

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2002年の論文

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2002年論文

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2002年論文

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2002年論文

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2002年論文

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2002年論文

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2002年论文

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name

Metabolic flux responses to pyruvate kinase knockout in Escherichia coli

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Metabolic flux responses to pyruvate kinase knockout in Escherichia coli

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Metabolic flux responses to pyruvate kinase knockout in Escherichia coli

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type

label

Metabolic flux responses to pyruvate kinase knockout in Escherichia coli

@ast

Metabolic flux responses to pyruvate kinase knockout in Escherichia coli

@en

Metabolic flux responses to pyruvate kinase knockout in Escherichia coli

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prefLabel

Metabolic flux responses to pyruvate kinase knockout in Escherichia coli

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Metabolic flux responses to pyruvate kinase knockout in Escherichia coli

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Metabolic flux responses to pyruvate kinase knockout in Escherichia coli

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JB.184.1.152-164.2002

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Journal of Bacteriology

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Metabolic flux responses to pyruvate kinase knockout in Escherichia coli

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P2093

Aaron Ponti

http://www.w3.org/2001/XMLSchema#string

J E Bailey

http://www.w3.org/2001/XMLSchema#string

Marcel Emmerling

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Michael Dauner

http://www.w3.org/2001/XMLSchema#string

Michel Hochuli

http://www.w3.org/2001/XMLSchema#string

Thomas Szyperski

http://www.w3.org/2001/XMLSchema#string

Uwe Sauer

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P2860

What's for dinner?: Entner-Doudoroff metabolism in Escherichia coli.

Phosphoenolpyruvate:carbohydrate phosphotransferase systems of bacteria

The Escherichia coli MG1655 in silico metabolic genotype: its definition, characteristics, and capabilities

Central carbon metabolism of Saccharomyces cerevisiae explored by biosynthetic fractional (13)C labeling of common amino acids.

Pyruvate oxidase contributes to the aerobic growth efficiency of Escherichia coli

Cloning of the two pyruvate kinase isoenzyme structural genes from Escherichia coli: the relative roles of these enzymes in pyruvate biosynthesis

Linear constrain relations in biochemical reaction systems III. Sequential application of data reconciliation for sensitive detection of systematic errors.

The EcoCyc and MetaCyc databases.

Metabolic network analysis. A powerful tool in metabolic engineering.

The udhA gene of Escherichia coli encodes a soluble pyridine nucleotide transhydrogenase.

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152-164

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scholarly article

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10.1128/JB.184.1.152-164.2002

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1

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11614602

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11741855

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Escherichia coli

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134756

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