Analysis of local helix bending in crystal structures of DNA oligonucleotides and DNA-protein complexes.
about
Role of stacking interactions in the binding sequence preferences of DNA bis-intercalators: insight from thermodynamic integration free energy simulations.Solution structure of a DNA duplex with a chiral alkyl phosphonate moietyDNA A-tract bending in three dimensions: Solving the dA4T4 vs. dT4A4 conundrumConformations of an adenine bulge in a DNA octamer and its influence on DNA structure from molecular dynamics simulationsUnderstanding the sequence-dependence of DNA groove dimensions: implications for DNA interactionsIncorporation of a cationic aminopropyl chain in DNA hairpins: thermodynamics and hydration.Bending and adaptability to proteins of the cAMP DNA-responsive element: molecular dynamics contrasted with NMRSmall local variations in B-form DNA lead to a large variety of global geometries which can accommodate most DNA-binding protein motifsNew insights into the structure of abasic DNA from molecular dynamics simulations.Does TATA matter? A structural exploration of the selectivity determinants in its complexes with TATA box-binding protein.A 5-nanosecond molecular dynamics trajectory for B-DNA: analysis of structure, motions, and solvation.How hormone receptor-DNA binding affects nucleosomal DNA: the role of symmetry.Hidden Markov models from molecular dynamics simulations on DNA.Toward a consensus view of duplex RNA flexibilityStructural equilibrium of DNA represented with different force fields.Molecular dynamics simulations of the 136 unique tetranucleotide sequences of DNA oligonucleotides. I. Research design and results on d(CpG) stepsIn vitro degradation behavior of chitosan based hybrid microparticles.DNA curvature and flexibility in vitro and in vivo.The ABCs of molecular dynamics simulations on B-DNA, circa 2012.Molecular dynamics simulations of the 136 unique tetranucleotide sequences of DNA oligonucleotides. II: sequence context effects on the dynamical structures of the 10 unique dinucleotide steps.The exocyclic groups of DNA modulate the affinity and positioning of the histone octamerEffects of cytosine hydroxymethylation on DNA strand separation.Influence of sequence on the conformation of the B-DNA helixDNA bending: the prevalence of kinkiness and the virtues of normality.What is the basis of sequence-directed curvature in DNAs containing A tracts?Modeling DNA-bending in the nucleosome: role of AA periodicity.A shared, non-canonical DNA conformation detected at DNA/protein contact sites and bent DNA in the absence of supercoiling or cognate protein binding.Molecular dynamics simulation reveals sequence-intrinsic and protein-induced geometrical features of the OL1 DNA operator.Comparative bending dynamics in DNA with and without regularly repeated adenine tracts.Distribution of sequence-dependent curvature in genomic DNA sequences.Flexible DNA: genetically unstable CTG.CAG and CGG.CCG from human hereditary neuromuscular disease genes.Characterization of polyamine synthesis pathway in Bacillus subtilis 168Conformational changes in DNA-binding proteins: Relationships with precomplex features and contributions to specificity and stabilityMOLECULAR DYNAMICS SIMULATIONS OF DNA DIMERS BASED ON REPLICA-EXCHANGE UMBRELLA SAMPLING I: TEST OF SAMPLING EFFICIENCYA crystallographic approach to DNA bending: prediction of nucleosome formation by DNA triple repeats and other repetitive sequences
P2860
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P2860
Analysis of local helix bending in crystal structures of DNA oligonucleotides and DNA-protein complexes.
description
1995 nî lūn-bûn
@nan
1995 թուականի Յունիսին հրատարակուած գիտական յօդուած
@hyw
1995 թվականի հունիսին հրատարակված գիտական հոդված
@hy
1995年の論文
@ja
1995年論文
@yue
1995年論文
@zh-hant
1995年論文
@zh-hk
1995年論文
@zh-mo
1995年論文
@zh-tw
1995年论文
@wuu
name
Analysis of local helix bendin ...... des and DNA-protein complexes.
@ast
Analysis of local helix bendin ...... des and DNA-protein complexes.
@en
Analysis of local helix bendin ...... des and DNA-protein complexes.
@nl
type
label
Analysis of local helix bendin ...... des and DNA-protein complexes.
@ast
Analysis of local helix bendin ...... des and DNA-protein complexes.
@en
Analysis of local helix bendin ...... des and DNA-protein complexes.
@nl
prefLabel
Analysis of local helix bendin ...... des and DNA-protein complexes.
@ast
Analysis of local helix bendin ...... des and DNA-protein complexes.
@en
Analysis of local helix bendin ...... des and DNA-protein complexes.
@nl
P2093
P2860
P1433
P1476
Analysis of local helix bendin ...... des and DNA-protein complexes.
@en
P2093
D L Beveridge
G Ravishanker
P2860
P304
P356
10.1016/S0006-3495(95)80427-3
P407
P577
1995-06-01T00:00:00Z