Haplotype phasing: existing methods and new developments. - sprookjes - yvandenbroek - TriplyDB

Haplotype phasing: existing methods and new developments.

Haplotype phasing: existing methods and new developments.

http://www.wikidata.org/entity/Q35554981

about

Application of computational methods in genetic study of inflammatory bowel disease A field guide to whole-genome sequencing, assembly and annotation Probing meiotic recombination and aneuploidy of single sperm cells by whole-genome sequencing Odintifier--A computational method for identifying insertions of organellar origin from modern and ancient high-throughput sequencing data based on haplotype phasing Genome of The Netherlands population-specific imputations identify an ABCA6 variant associated with cholesterol levels Determination of haplotypes at structurally complex regions using emulsion haplotype fusion PCR Design of a bovine low-density SNP array optimized for imputation Introduction to deep sequencing and its application to drug addiction research with a focus on rare variants.On combining reference data to improve imputation accuracy.Improving the accuracy and efficiency of identity-by-descent detection in population data Understanding the origin of species with genome-scale data: modelling gene flow.Testing for rare variant associations in the presence of missing data.HapFABIA: identification of very short segments of identity by descent characterized by rare variants in large sequencing data.Dating rare mutations from small samples with dense marker data.A bioinformatics workflow for detecting signatures of selection in genomic data Joint analysis of sequence data and single-nucleotide polymorphism data using pedigree information for imputation and recombination inference.High-accuracy haplotype imputation using unphased genotype data as the references CoVaMa: Co-Variation Mapper for disequilibrium analysis of mutant loci in viral populations using next-generation sequence data.Imputing Genotypes in Biallelic Populations from Low-Coverage Sequence Data.References for Haplotype Imputation in the Big Data Era.scphaser: haplotype inference using single-cell RNA-seq data Exploiting next-generation sequencing to solve the haplotyping puzzle in polyploids: a simulation study.Identification of key contributors in complex population structures.hsphase: an R package for pedigree reconstruction, detection of recombination events, phasing and imputation of half-sib family groups Genetic-epigenetic interactions in cis: a major focus in the post-GWAS era A new approach for efficient genotype imputation using information from relatives.The role of replicates for error mitigation in next-generation sequencing.Polymorphisms and a haplotype in heparanase gene associations with the progression and prognosis of gastric cancer in a northern Chinese population.Accurate whole-genome sequencing and haplotyping from 10 to 20 human cells.Phasing of many thousands of genotyped samples Genotype-based test in mapping cis-regulatory variants from allele-specific expression data.HapCompass: a fast cycle basis algorithm for accurate haplotype assembly of sequence data.Efficiency and power as a function of sequence coverage, SNP array density, and imputation.Haplotype estimation using sequencing reads.Associations of non-metastatic cells 1 gene polymorphisms with lymph node metastasis risk of gastric cancer in Northern Chinese population.Species formation by host shifting in avian malaria parasites.The impact of whole-genome sequencing on the reconstruction of human population history.Strategies and utility of imputed SNP genotypes for genomic analysis in dairy cattle.A linear-time algorithm for reconstructing zero-recombinant haplotype configuration on a pedigree.A fast and accurate algorithm for single individual haplotyping.

P2860

Q26774595-DB849651-CD2F-4648-9187-04819E504D57 Q26860930-83B47455-0E89-4AC7-AFB1-4357364245A8 Q28281877-D971F1B2-11F8-4EDD-8376-F39B415CEF32 Q28646132-991640C4-0D47-4827-84D4-17A37C3CAACD Q28652132-708BE69B-42A1-478A-BDC4-1C70745927ED Q28710007-773BDCDF-8554-4280-9526-8B2FC7B8D4C4 Q28730891-50489D7C-1ED9-48FD-9E3E-1B230FFAA157 Q30408390-FF6F3348-5672-4F36-A5D0-31646F5078A8 Q30587059-708C9FDF-3687-496D-BF04-FF05FC0A89DD Q30608038-8EA968F4-111B-41BC-A03B-11A181EF905D Q30622876-31D24960-5174-4125-9359-38F0E99C6E8A Q30645712-637C4933-F6ED-45FB-9841-576D0972F7C0 Q30686308-4C7192FD-195F-4D17-A8CA-3007642D10A8 Q30827825-1E96F25C-52EF-473A-8512-6E29430A9465 Q30849548-B5821876-E1A2-42AA-96D8-CD8A1DDABF50 Q30879639-2486AE06-214B-4CE7-9B3B-BEF8EE555270 Q30984376-E2EDBEA0-B56A-40FB-A1C9-1B5B30155467 Q30997587-3DAC4502-A118-4244-8F7A-67B90495FD1F Q31034420-5FCBC953-8772-4C82-B53D-A55BD3A92CAB Q31106426-1BF4D0F1-5925-41F8-980B-2DD5F9086150 Q31119904-D9C56D50-A333-4FE1-9337-5D4A415F8115 Q33364542-5F45D913-FE06-4BE5-AB2D-5575A80325D1 Q33693784-5E33E017-8741-490D-BD97-6A281BE345ED Q33801240-DFFC8DCA-C81B-4FDC-9F50-410ED9F85F1C Q33814873-15799FA7-9698-4D22-B6D5-13E8AE4CA35D Q33828250-3C444662-7148-4BAF-B4B7-D7825DF62E1E Q33921022-177F4935-D6A3-474C-9823-8A85EA5D8BE1 Q34140460-83546778-F937-4B09-8F4E-F0E3438194D4 Q34287418-00E2E1E1-72AF-4C93-A1F9-3A3405C903DB Q34293327-7B85741A-24EA-456B-9A59-C693D83CEBF0 Q34299704-669D3E2D-9300-4185-AB01-34DC068E2A4B Q34303947-88D689C0-3DA7-40E5-9686-2A9389AC1EF2 Q34341329-2452205E-0F51-421F-AE44-60EE8598F6F3 Q34375384-89B92BE4-5F53-4A4D-B700-4B8429CBA97C Q34383772-92A4CB24-C67F-4E4B-A484-1B8E00ABADA2 Q34383883-9D2255B9-381F-4324-8413-0583620ED10A Q34401955-09AC88A9-6B7B-42E5-A81D-4D75B38F29F6 Q34436014-8531A3DD-B6F3-417C-AB18-1F27151186C7 Q34529565-EE3A2DCD-36E6-46A7-99B0-B8A5783780E1 Q34530584-B47C1414-3289-449C-8FDB-092C6D6F893A

P2860

Haplotype phasing: existing methods and new developments.

http://www.wikidata.org/entity/Q35554981

description

2011 nî lūn-bûn

@nan

2011 թուականի Սեպտեմբերին հրատարակուած գիտական յօդուած

@hyw

2011 թվականի սեպտեմբերին հրատարակված գիտական հոդված

@hy

2011年の論文

@ja

2011年論文

@yue

2011年論文

@zh-hant

2011年論文

@zh-hk

2011年論文

@zh-mo

2011年論文

@zh-tw

2011年论文

@wuu

name

Haplotype phasing: existing methods and new developments.

@ast

Haplotype phasing: existing methods and new developments.

@en

type

label

Haplotype phasing: existing methods and new developments.

@ast

Haplotype phasing: existing methods and new developments.

@en

prefLabel

Haplotype phasing: existing methods and new developments.

@ast

Haplotype phasing: existing methods and new developments.

@en

P1433

Q35554981-2A010A68-7249-4D14-AAD4-B9866EF98A3D

P1476

Q35554981-60A2F7D0-FF0A-4F3F-A02A-C3EFD085DA34

P2093

Q35554981-82E49CB0-FDEC-43FB-98C8-EBFEDFD3DF5B

Q35554981-B8DA42E2-0567-4EF4-B9C4-E321C9F9824F

P2860

Q35554981-0093D4C5-175B-4C49-AB1B-7113F0E0FBF1

Q35554981-02E75D58-168B-4C3A-804F-B6457A467A62

Q35554981-02FFFA4C-942B-4F60-902E-E0D29813FD1E

Q35554981-0337973E-114F-4526-B398-9DED7D3162FE

Q35554981-042DA250-F7CF-45B8-BD38-919B96EC39FE

Q35554981-046C4E43-3920-43F1-A953-0E7569700B12

Q35554981-09747C24-8465-4D3F-977B-0B96D112655D

Q35554981-0AAEFAC0-476C-4E0E-9A1E-972FC103D9ED

Q35554981-0F3943A7-749E-43B2-A069-FFF134757EB2

Q35554981-1461B1D2-9AFE-4E7C-B6EE-A0681F9B3C83

P2888

Q35554981-17C55B33-08BA-4F99-A207-BCF48A724CF4

P304

Q35554981-D62AEBE8-56A3-4EE6-AF4D-4AB9EA3B70A4

P31

Q35554981-B060973A-D684-421C-8B14-099C5569365E

P356

Q35554981-CF49F86B-C1F1-478A-9C09-2E7F7FCF53D9

P433

Q35554981-1DECE1B9-7811-4EBF-AA7F-6B406F6684F1

P478

Q35554981-E66C6A28-35E1-4C48-B06C-F73E1153BA82

P577

Q35554981-FAFF43B6-F3CE-47CF-A202-8C6C3B89E75F

P5875

Q35554981-375B4B84-38C7-4B96-91D9-516363139621

P698

Q35554981-50ABE8B3-9D4C-44D2-9103-D3A0A3B07ABC

P932

Q35554981-7AC6B123-C623-44B3-AA68-884281D9BDEB

P356

P1433

Nature Reviews Genetics

P1476

Haplotype phasing: existing methods and new developments.

@en

P2093

Brian L Browning

http://www.w3.org/2001/XMLSchema#string

Sharon R Browning

http://www.w3.org/2001/XMLSchema#string

P2860

Initial sequencing and analysis of the human genome

The diploid genome sequence of an individual human

A flexible and accurate genotype imputation method for the next generation of genome-wide association studies

Analysis of genetic inheritance in a family quartet by whole-genome sequencing

Detecting recent positive selection in the human genome from haplotype structure

Genome-wide detection and characterization of positive selection in human populations

A fast and flexible statistical model for large-scale population genotype data: applications to inferring missing genotypes and haplotypic phase

Genome-wide association study of 14,000 cases of seven common diseases and 3,000 shared controls

A map of human genome variation from population-scale sequencing

MaCH: using sequence and genotype data to estimate haplotypes and unobserved genotypes

P2888

P304

703-714

http://www.w3.org/2001/XMLSchema#string

P31

scholarly article

P356

10.1038/NRG3054

http://www.w3.org/2001/XMLSchema#string

P433

10

http://www.w3.org/2001/XMLSchema#string

P478

12

http://www.w3.org/2001/XMLSchema#string

P577

2011-09-16T00:00:00Z

http://www.w3.org/2001/XMLSchema#dateTime

P5875

51646637

http://www.w3.org/2001/XMLSchema#string

P698

21921926

http://www.w3.org/2001/XMLSchema#string

P932

3217888

http://www.w3.org/2001/XMLSchema#string