Characterizing transcriptional heterogeneity through pathway and gene set overdispersion analysis
about
Design and computational analysis of single-cell RNA-sequencing experimentsSingle-Cell Transcriptomics Bioinformatics and Computational ChallengesTradict enables accurate prediction of eukaryotic transcriptional states from 100 marker genes.ROMA: Representation and Quantification of Module Activity from Target Expression Data.FastProject: a tool for low-dimensional analysis of single-cell RNA-Seq dataA step-by-step workflow for low-level analysis of single-cell RNA-seq data with Bioconductor.Scater: pre-processing, quality control, normalization and visualization of single-cell RNA-seq data in RDetecting heterogeneity in single-cell RNA-Seq data by non-negative matrix factorizationAnalogous mechanism regulating formation of neocortical basal radial glia and cerebellar Bergmann glia.Epigenetic Memory Underlies Cell-Autonomous Heterogeneous Behavior of Hematopoietic Stem CellsRobust Inference of Cell-to-Cell Expression Variations from Single- and K-Cell Profiling.Single-Cell RNA Sequencing of Human T Cells.ASAP: a Web-based platform for the analysis and interactive visualization of single-cell RNA-seq data.Fast and accurate single-cell RNA-seq analysis by clustering of transcript-compatibility countsSingle-cell RNA-seq reveals novel regulators of human embryonic stem cell differentiation to definitive endoderm.Neuronal subtypes and diversity revealed by single-nucleus RNA sequencing of the human brain.Cell-Type-Specific Alternative Splicing Governs Cell Fate in the Developing Cerebral Cortex.Single-cell transcriptome conservation in cryopreserved cells and tissuesCerebral cortical neuron diversity and development at single-cell resolution.chromVAR: inferring transcription-factor-associated accessibility from single-cell epigenomic data.A comparative strategy for single-nucleus and single-cell transcriptomes confirms accuracy in predicted cell-type expression from nuclear RNA.Dr.seq2: A quality control and analysis pipeline for parallel single cell transcriptome and epigenome data.Computational methods for trajectory inference from single-cell transcriptomics.Pseudotemporal Ordering of Single Cells Reveals Metabolic Control of Postnatal β Cell Proliferation.Disentangling neural cell diversity using single-cell transcriptomics.Revealing the vectors of cellular identity with single-cell genomics.Single-cell RNA-seq ties macrophage polarization to growth rate of intracellular Salmonella.Early transcriptional and epigenetic regulation of CD8+ T cell differentiation revealed by single-cell RNA sequencing.Advances in single-cell RNA sequencing and its applications in cancer research.HopLand: single-cell pseudotime recovery using continuous Hopfield network-based modeling of Waddington's epigenetic landscape.Human Astrocyte Maturation Captured in 3D Cerebral Cortical Spheroids Derived from Pluripotent Stem Cells.Single-Cell RNA-Seq Analysis of Infiltrating Neoplastic Cells at the Migrating Front of Human Glioblastoma.Integrated single-cell genetic and transcriptional analysis suggests novel drivers of chronic lymphocytic leukemia.Combating subclonal evolution of resistant cancer phenotypes.Single-cell RNA sequencing reveals intrinsic and extrinsic regulatory heterogeneity in yeast responding to stress.f-scLVM: scalable and versatile factor analysis for single-cell RNA-seq.Clustering single cells: a review of approaches on high-and low-depth single-cell RNA-seq data.Mapping gene regulatory networks from single-cell omics data.Application of single-cell sequencing in human cancer.Dual MET and ERBB inhibition overcomes intratumor plasticity in osimertinib-resistant-advanced non-small-cell lung cancer (NSCLC).
P2860
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P2860
Characterizing transcriptional heterogeneity through pathway and gene set overdispersion analysis
description
2016 nî lūn-bûn
@nan
2016年の論文
@ja
2016年論文
@yue
2016年論文
@zh-hant
2016年論文
@zh-hk
2016年論文
@zh-mo
2016年論文
@zh-tw
2016年论文
@wuu
2016年论文
@zh
2016年论文
@zh-cn
name
Characterizing transcriptional ...... ne set overdispersion analysis
@ast
Characterizing transcriptional ...... ne set overdispersion analysis
@en
type
label
Characterizing transcriptional ...... ne set overdispersion analysis
@ast
Characterizing transcriptional ...... ne set overdispersion analysis
@en
prefLabel
Characterizing transcriptional ...... ne set overdispersion analysis
@ast
Characterizing transcriptional ...... ne set overdispersion analysis
@en
P2093
P2860
P50
P356
P1433
P1476
Characterizing transcriptional ...... ne set overdispersion analysis
@en
P2093
Fiona Kaper
Gwendolyn E Kaeser
Jerold Chun
Jian-Bing Fan
Joseph L Herman
Neeraj Salathia
Yun C Yung
P2860
P2888
P304
P356
10.1038/NMETH.3734
P577
2016-01-18T00:00:00Z