Distribution, diversity, evolution, and survival of Helitrons in the maize genome. - sprookjes - yvandenbroek - TriplyDB

Distribution, diversity, evolution, and survival of Helitrons in the maize genome.

Distribution, diversity, evolution, and survival of Helitrons in the maize genome.

http://www.wikidata.org/entity/Q37446470

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A cornucopia of Helitrons shapes the maize genome Rolling-circle transposons catalyze genomic innovation in a mammalian lineage Transposable elements: powerful contributors to angiosperm evolution and diversity Turning gold into 'junk': transposable elements utilize central proteins of cellular networks The genome of the pear (Pyrus bretschneideri Rehd.).Pervasive horizontal transfer of rolling-circle transposons among animals A genome-wide analysis of simple sequence repeats in maize and the development of polymorphism markers from next-generation sequence data.ModuleOrganizer: detecting modules in families of transposable elements.Tc1-like transposable elements in plant genomes.DINE-1, the highest copy number repeats in Drosophila melanogaster are non-autonomous endonuclease-encoding rolling-circle transposable elements (Helentrons).Exceptional lability of a genomic complex in rice and its close relatives revealed by interspecific and intraspecific comparison and population analysis.Dosage compensation via transposable element mediated rewiring of a regulatory network.HelitronScanner uncovers a large overlooked cache of Helitron transposons in many plant genomes.Emerging knowledge from genome sequencing of crop species.Genome-wide characterization of the HD-ZIP IV transcription factor family in maize: preferential expression in the epidermis.Structural characterization of helitrons and their stepwise capturing of gene fragments in the maize genome.The turbulent life of Sirevirus retrotransposons and the evolution of the maize genome: more than ten thousand elements tell the story.MASiVEdb: the Sirevirus Plant Retrotransposon Database.Reference genome sequence of the model plant Setaria.Pervasive gene content variation and copy number variation in maize and its undomesticated progenitor Characterization of transposable elements in the ectomycorrhizal fungus Laccaria bicolor.Intraspecific sequence comparisons reveal similar rates of non-collinear gene insertion in the B and D genomes of bread wheat Comparative sequence analysis of the Ghd7 orthologous regions revealed movement of Ghd7 in the grass genomes.Pack-Mutator-like transposable elements (Pack-MULEs) induce directional modification of genes through biased insertion and DNA acquisition.The struggle for life of the genome's selfish architects Highly expressed captured genes and cross-kingdom domains present in Helitrons create novel diversity in Pleurotus ostreatus and other fungi.Organization and evolution of transposable elements along the bread wheat chromosome 3B Mobilizing the genome of Lepidoptera through novel sequence gains and end creation by non-autonomous Lep1 Helitrons.Gene capture by Helitron transposons reshuffles the transcriptome of maize.The making of a genomic parasite - the Mothra family sheds light on the evolution of Helitrons in plants.MCScanX: a toolkit for detection and evolutionary analysis of gene synteny and collinearity.A call for benchmarking transposable element annotation methods.Differential pre-mRNA Splicing Alters the Transcript Diversity of Helitrons Between the Maize Inbred Lines.A Helitron transposon reconstructed from bats reveals a novel mechanism of genome shuffling in eukaryotes Large-Scale Gene Relocations following an Ancient Genome Triplication Associated with the Diversification of Core Eudicots A large insertion in bHLH transcription factor BrTT8 resulting in yellow seed coat in Brassica rapa.Helitrons in Drosophila: Chromatin modulation and tandem insertions DNA methylation changes facilitated evolution of genes derived from Mutator-like transposable elements.Young, intact and nested retrotransposons are abundant in the onion and asparagus genomes.Identification and evolution of the silkworm helitrons and their contribution to transcripts.

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Distribution, diversity, evolution, and survival of Helitrons in the maize genome.

http://www.wikidata.org/entity/Q37446470

description

2009 nî lūn-bûn

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2009年の論文

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2009年学术文章

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2009年学术文章

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2009年學術文章

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2009年學術文章

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name

Distribution, diversity, evolution, and survival of Helitrons in the maize genome.

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Distribution, diversity, evolution, and survival of Helitrons in the maize genome.

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type

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Distribution, diversity, evolution, and survival of Helitrons in the maize genome.

@en

Distribution, diversity, evolution, and survival of Helitrons in the maize genome.

@nl

prefLabel

Distribution, diversity, evolution, and survival of Helitrons in the maize genome.

@en

Distribution, diversity, evolution, and survival of Helitrons in the maize genome.

@nl

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Proceedings of the National Academy of Sciences of the United States of America

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Distribution, diversity, evolution, and survival of Helitrons in the maize genome.

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Jeffrey L Bennetzen

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Lixing Yang

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P2860

The Physcomitrella Genome Reveals Evolutionary Insights into the Conquest of Land by Plants

The B73 Maize Genome: Complexity, Diversity, and Dynamics

Rolling-circle transposons in eukaryotes

PAML 4: phylogenetic analysis by maximum likelihood

Gene duplication and exon shuffling by helitron-like transposons generate intraspecies diversity in maize

Repbase Update, a database of eukaryotic repetitive elements

A unified classification system for eukaryotic transposable elements

Maize haplotype with a helitron-amplified cytidine deaminase gene copy.

A novel class of Helitron-related transposable elements in maize contain portions of multiple pseudogenes.

Transcription-related mutations and GC content drive variation in nucleotide substitution rates across the genomes of Arabidopsis thaliana and Arabidopsis lyrata.

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19922-19927

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10.1073/PNAS.0908008106

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