Noncoding regulatory sequences of Ciona exhibit strong correspondence between evolutionary constraint and functional importance.
about
A haplome alignment and reference sequence of the highly polymorphic Ciona savignyi genomeBrachyury, Foxa2 and the cis-Regulatory Origins of the NotochordFunctional Brachyury binding sites establish a temporal read-out of gene expression in the Ciona notochordEvolutionary genomics of fast evolving tunicatesHow fast is the sessile ciona?Ciona intestinalis as a model for cardiac development.Huntingtin gene evolution in Chordata and its peculiar features in the ascidian Ciona genusDiploid genome reconstruction of Ciona intestinalis and comparative analysis with Ciona savignyiComputational prediction and experimental validation of Ciona intestinalis microRNA genesEvolutionary conservation of zinc finger transcription factor binding sites in promoters of genes co-expressed with WT1 in prostate cancermiRTRAP, a computational method for the systematic identification of miRNAs from high throughput sequencing dataProspects for identifying functional variation across the genomeDistinct functional constraints partition sequence conservation in a cis-regulatory elementDe novo discovery of a tissue-specific gene regulatory module in a chordate.New insights into the evolution of metazoan tyrosinase gene family.Chromosomal mapping of 170 BAC clones in the ascidian Ciona intestinalis.Cross-validated methods for promoter/transcription start site mapping in SL trans-spliced genes, established using the Ciona intestinalis troponin I geneParallel evolution of chordate cis-regulatory code for development.Identifying transcriptional cis-regulatory modules in animal genomes.Divergent mechanisms regulate conserved cardiopharyngeal development and gene expression in distantly related ascidians.Evidence that purifying selection acts on promoter sequences.Muscle development in Ciona intestinalis requires the b-HLH myogenic regulatory factor gene Ci-MRF.Histone H3 K27 acetylation marks a potent enhancer element on the adipogenic master regulator gene Pparg2.Genome-wide identification and characterization of transcription start sites and promoters in the tunicate Ciona intestinalisFunctional studies of the Ciona intestinalis myogenic regulatory factor reveal conserved features of chordate myogenesisCis-regulatory organization of the Pax6 gene in the ascidian Ciona intestinalisGenomic approaches towards finding cis-regulatory modules in animalsStudy of Cis-regulatory Elements in the Ascidian Ciona intestinalis.Initial deployment of the cardiogenic gene regulatory network in the basal chordate, Ciona intestinalis.Experimental validation of predicted mammalian erythroid cis-regulatory modules.Vascular Endothelial Growth Factor Receptor Family in Ascidians, Halocynthia roretzi (Sea Squirt). Its High Expression in Circulatory System-Containing Tissues.The C. savignyi genetic map and its integration with the reference sequence facilitates insights into chordate genome evolution.Identification of functional transcription factor binding sites using closely related Saccharomyces species.Assembly of polymorphic genomes: algorithms and application to Ciona savignyi.
P2860
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P2860
Noncoding regulatory sequences of Ciona exhibit strong correspondence between evolutionary constraint and functional importance.
description
2004 nî lūn-bûn
@nan
2004年の論文
@ja
2004年論文
@yue
2004年論文
@zh-hant
2004年論文
@zh-hk
2004年論文
@zh-mo
2004年論文
@zh-tw
2004年论文
@wuu
2004年论文
@zh
2004年论文
@zh-cn
name
Noncoding regulatory sequences ...... int and functional importance.
@en
type
label
Noncoding regulatory sequences ...... int and functional importance.
@en
prefLabel
Noncoding regulatory sequences ...... int and functional importance.
@en
P2093
P2860
P356
P1433
P1476
Noncoding regulatory sequences ...... int and functional importance.
@en
P2093
Arend Sidow
Brad Davidson
Christopher D Brown
David S Johnson
William C Smith
P2860
P304
P356
10.1101/GR.2964504
P577
2004-11-15T00:00:00Z