A gold standard set of mechanistically diverse enzyme superfamilies.
about
Annotation error in public databases: misannotation of molecular function in enzyme superfamiliesFunctional classification using phylogenomic inferenceA large-scale evaluation of computational protein function predictionThe Enzyme Function Initiative.Improving classification in protein structure databases using text mining.High precision multi-genome scale reannotation of enzyme function by EFICAz.Towards structured output prediction of enzyme functionGeMMA: functional subfamily classification within superfamilies of predicted protein structural domains.Improving the quality of protein similarity network clustering algorithms using the network edge weight distribution.Biocuration in the structure-function linkage database: the anatomy of a superfamilyFunctional classification of protein 3D structures from predicted local interaction sites.High-quality sequence clustering guided by network topology and multiple alignment likelihood.Cutoff Scanning Matrix (CSM): structural classification and function prediction by protein inter-residue distance patternsExploring the evolution of novel enzyme functions within structurally defined protein superfamilies.Seq2Ref: a web server to facilitate functional interpretationEvaluation and improvements of clustering algorithms for detecting remote homologous protein families.Biochemical functional predictions for protein structures of unknown or uncertain functionHMM-ModE: implementation, benchmarking and validation with HMMER3.Massive fungal biodiversity data re-annotation with multi-level clusteringDomSign: a top-down annotation pipeline to enlarge enzyme space in the protein universe.Defining sequence space and reaction products within the cyanuric acid hydrolase (AtzD)/barbiturase protein family.MotifCluster: an interactive online tool for clustering and visualizing sequences using shared motifs.Target selection and annotation for the structural genomics of the amidohydrolase and enolase superfamiliesFunctional Annotations of Paralogs: A Blessing and a CurseThe Structure-Function Linkage DatabaseFunTree: a resource for exploring the functional evolution of structurally defined enzyme superfamilies.Comparison of topological clustering within protein networks using edge metrics that evaluate full sequence, full structure, and active site microenvironment similarity.Community detection in sequence similarity networks based on attribute clustering.Genomic Enzymology: Web Tools for Leveraging Protein Family Sequence-Function Space and Genome Context to Discover Novel Functions.Characterization and prediction of residues determining protein functional specificity.Predicting enzymatic function from global binding site descriptors.Comprehensive cluster analysis with Transitivity Clustering.Accurate prediction of interfacial residues in two-domain proteins using evolutionary information: implications for three-dimensional modeling.Recognition of protein function using the local similarity.New computational approaches to understanding molecular protein function.
P2860
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P2860
A gold standard set of mechanistically diverse enzyme superfamilies.
description
2006 nî lūn-bûn
@nan
2006 թուականի Յունուարին հրատարակուած գիտական յօդուած
@hyw
2006 թվականի հունվարին հրատարակված գիտական հոդված
@hy
2006年の論文
@ja
2006年論文
@yue
2006年論文
@zh-hant
2006年論文
@zh-hk
2006年論文
@zh-mo
2006年論文
@zh-tw
2006年论文
@wuu
name
A gold standard set of mechanistically diverse enzyme superfamilies
@nl
A gold standard set of mechanistically diverse enzyme superfamilies.
@ast
A gold standard set of mechanistically diverse enzyme superfamilies.
@en
A gold standard set of mechanistically diverse enzyme superfamilies.
@en-gb
type
label
A gold standard set of mechanistically diverse enzyme superfamilies
@nl
A gold standard set of mechanistically diverse enzyme superfamilies.
@ast
A gold standard set of mechanistically diverse enzyme superfamilies.
@en
A gold standard set of mechanistically diverse enzyme superfamilies.
@en-gb
prefLabel
A gold standard set of mechanistically diverse enzyme superfamilies
@nl
A gold standard set of mechanistically diverse enzyme superfamilies.
@ast
A gold standard set of mechanistically diverse enzyme superfamilies.
@en
A gold standard set of mechanistically diverse enzyme superfamilies.
@en-gb
P2093
P2860
P3181
P356
P1433
P1476
A gold standard set of mechanistically diverse enzyme superfamilies.
@en
P2093
Jennifer L Seffernick
John A Gerlt
Shoshana D Brown
P2860
P2888
P3181
P356
10.1186/GB-2006-7-1-R8
P407
P577
2006-01-31T00:00:00Z
P5875
P6179
1028567887