The other 90% of the protein: assessment beyond the Calphas for CASP8 template-based and high-accuracy models. - Wikidata - awgldk - TriplyDB

The other 90% of the protein: assessment beyond the Calphas for CASP8 template-based and high-accuracy models.

The other 90% of the protein: assessment beyond the Calphas for CASP8 template-based and high-accuracy models.

http://www.wikidata.org/entity/Q24604646

about

I-TASSER: a unified platform for automated protein structure and function prediction Improving the physical realism and structural accuracy of protein models by a two-step atomic-level energy minimization Atomic-level protein structure refinement using fragment-guided molecular dynamics conformation sampling Target domain definition and classification in CASP8 Crystal Structure and Computational Modeling of the Fab Fragment from a Protective Anti-Ricin Monoclonal Antibody Evaluation of template-based models in CASP8 with standard measures Assessment of CASP10 contact-assisted predictions.i3Drefine software for protein 3D structure refinement and its assessment in CASP10 Evaluation of predictions in the CASP10 model refinement category.lDDT: a local superposition-free score for comparing protein structures and models using distance difference tests.CASP prediction center infrastructure and evaluation measures in CASP10 and CASP ROLL.New insights into the interdependence between amino acid stereochemistry and protein structure Assessment of template-based protein structure predictions in CASP10 Template based protein structure modeling by global optimization in CASP11.Template-based protein structure prediction in CASP11 and retrospect of I-TASSER in the last decade.Assessment of the protein-structure refinement category in CASP8 CASP11 statistics and the prediction center evaluation system Understanding the physical basis for the side-chain conformational preferences of methionine.MULTICOM: a multi-level combination approach to protein structure prediction and its assessments in CASP8 Assessment of refinement of template-based models in CASP11.Assessment of template-based modeling of protein structure in CASP11.FF12MC: A revised AMBER forcefield and new protein simulation protocol.Systematic analysis of short internal indels and their impact on protein folding.Alternate states of proteins revealed by detailed energy landscape mapping Determining protein similarity by comparing hydrophobic core structure.Validation of Protein Structure Models using Network Similarity Score.De novo protein structure prediction by dynamic fragment assembly and conformational space annealing.Assessment of template based protein structure predictions in CASP9.Assessment of protein structure refinement in CASP9.GalaxyWEB server for protein structure prediction and refinement.3Drefine: consistent protein structure refinement by optimizing hydrogen bonding network and atomic-level energy minimization.CAD-score: a new contact area difference-based function for evaluation of protein structural models.Understanding the general packing rearrangements required for successful template based modeling of protein structure from a CASP experiment.GalaxyRefine: Protein structure refinement driven by side-chain repacking Automated processing of label-free Raman microscope images of macrophage cells with standardized regression for high-throughput analysis.On the significance of an RNA tertiary structure prediction.Computational analysis of pathogen-borne metallo β-lactamases reveals discriminating structural features between B1 types.Improving physical realism, stereochemistry, and side-chain accuracy in homology modeling: Four approaches that performed well in CASP8.CASP8 results in context of previous experiments.RNAlyzer--novel approach for quality analysis of RNA structural models.

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P2860

The other 90% of the protein: assessment beyond the Calphas for CASP8 template-based and high-accuracy models.

http://www.wikidata.org/entity/Q24604646

description

2009 nî lūn-bûn

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2009 թուականի Յունուարին հրատարակուած գիտական յօդուած

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2009 թվականի հունվարին հրատարակված գիտական հոդված

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2009年の論文

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2009年論文

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2009年論文

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2009年論文

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2009年論文

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2009年論文

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2009年论文

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name

The other 90% of the protein: ...... based and high-accuracy models

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The other 90% of the protein: ...... ased and high-accuracy models.

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The other 90% of the protein: ...... ased and high-accuracy models.

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type

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The other 90% of the protein: ...... based and high-accuracy models

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The other 90% of the protein: ...... ased and high-accuracy models.

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The other 90% of the protein: ...... ased and high-accuracy models.

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The other 90% of the protein: ...... based and high-accuracy models

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The other 90% of the protein: ...... ased and high-accuracy models.

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The other 90% of the protein: ...... ased and high-accuracy models.

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The other 90% of the protein: ...... ased and high-accuracy models.

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P2093

Adam Zemla

http://www.w3.org/2001/XMLSchema#string

Christopher J Williams

http://www.w3.org/2001/XMLSchema#string

Gary J Kapral

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Jeffrey J Headd

http://www.w3.org/2001/XMLSchema#string

Jeremy N Block

http://www.w3.org/2001/XMLSchema#string

Robert A Gillespie

http://www.w3.org/2001/XMLSchema#string

Vincent B Chen

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W Bryan Arendall

http://www.w3.org/2001/XMLSchema#string

P2860

KinImmerse: Macromolecular VR for NMR ensembles

Target domain definition and classification in CASP8

LGA: A method for finding 3D similarities in protein structures

The kinemage: a tool for scientific communication

MolProbity: all-atom contacts and structure validation for proteins and nucleic acids

Structure of the guide-strand-containing argonaute silencing complex

How amino-acid insertions are allowed in an alpha-helix of T4 lysozyme

Searching protein structure databases with DaliLite v.3

Structure validation by Calpha geometry: phi,psi and Cbeta deviation

Assessment of CASP7 predictions in the high accuracy template-based modeling category

P304

29-49

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scholarly article

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4744081

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P356

10.1002/PROT.22551

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P407

P433

S9

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P478

77 Suppl 9

http://www.w3.org/2001/XMLSchema#string

P50

David C. Richardson

Daniel A. Keedy

Jane Shelby Richardson

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2009-01-01T00:00:00Z

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26790487

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19731372

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2877634

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