Improving the physical realism and structural accuracy of protein models by a two-step atomic-level energy minimization - Wikidata - awgldk - TriplyDB

Improving the physical realism and structural accuracy of protein models by a two-step atomic-level energy minimization

Improving the physical realism and structural accuracy of protein models by a two-step atomic-level energy minimization

http://www.wikidata.org/entity/Q24626539

about

Comparative genomics of closely related Salmonella enterica serovar Typhi strains reveals genome dynamics and the acquisition of novel pathogenic elements Structural insight into the TRIAP1/PRELI-like domain family of mitochondrial phospholipid transfer complexes Computational Docking Study of p7 Ion Channel from HCV Genotype 3 and Genotype 4 and Its Interaction with Natural Compounds Cardiac contractility structure-activity relationship and ligand-receptor interactions; the discovery of unique and novel molecular switches in myosuppressin signaling Docking studies of Pakistani HCV NS3 helicase: a possible antiviral drug target Analysis of worldwide sequence mutations in Zika virus proteins E, NS1, NS3 and NS5 from a structural point of view In the absence of ATPase activity, pre-RC formation is blocked prior to MCM2-7 hexamer dimerization.Diacylglycerol Kinase-ε: Properties and Biological Roles Ab initio protein structure assembly using continuous structure fragments and optimized knowledge-based force field Cloning, expression and characterization of UDP-N-acetylglucosamine enolpyruvyl transferase (MurA) from Wolbachia endosymbiont of human lymphatic filarial parasite Brugia malayi Structural analysis of viral infectivity factor of HIV type 1 and its interaction with A3G, EloC and EloB Genetics and Molecular Modeling of New Mutations of Familial Intrahepatic Cholestasis in a Single Italian Center TP53 copy number expansion is associated with the evolution of increased body size and an enhanced DNA damage response in elephants A naturally occurring bovine APOBEC3 confers resistance to bovine lentiviruses: implication for the co-evolution of bovids and their lentiviruses Variants in the Oxidoreductase PYROXD1 Cause Early-Onset Myopathy with Internalized Nuclei and Myofibrillar Disorganization A novel approach using C. elegans DNA damage-induced apoptosis to characterize the dynamics of uptake transporters for therapeutic drug discoveries In Silico Structure Prediction of Human Fatty Acid Synthase-Dehydratase: A Plausible Model for Understanding Active Site Interactions Computational prediction of Usutu virus E protein B-cell and T-cell epitopes for potential vaccine development Functional and structural characterization of a novel putative cysteine protease cell wall-modifying multi-domain enzyme selected from a microbial metagenome.Perforin-like protein PPLP2 permeabilizes the red blood cell membrane during egress of Plasmodium falciparum gametocytes Discovery of Novel Leptospirosis Vaccine Candidates Using Reverse and Structural Vaccinology.In silico determination and validation of baumannii acinetobactin utilization a structure and ligand binding site.Virtual screening studies reveal linarin as a potential natural inhibitor targeting CDK4 in retinoblastoma.Study of PKRBD in HCV genotype 3a infected patients in response to interferon therapy in Pakistani population.I-TASSER server: new development for protein structure and function predictions 3DRobot: automated generation of diverse and well-packed protein structure decoys.Protein Structure and Function Prediction Using I-TASSER Effect of natural polymorphism on structure and function of the Yersinia pestis outer membrane porin F (OmpF protein): a computational study.Molecular Modeling and Structural Analysis of Arylesterase of Ancylostoma Duodenale.One-Dimensional Structural Properties of Proteins in the Coarse-Grained CABS Model.Molecular and Structural Characterization of the Tegumental 20.6-kDa Protein in Clonorchis sinensis as a Potential Druggable Target.CABS-flex: Server for fast simulation of protein structure fluctuations Ab Initio structure prediction for Escherichia coli: towards genome-wide protein structure modeling and fold assignment.CABS-fold: Server for the de novo and consensus-based prediction of protein structure.In silico-based vaccine design against Ebola virus glycoprotein Across-proteome modeling of dimer structures for the bottom-up assembly of protein-protein interaction networks.Ophiophagus hannah venom: proteome, components bound by Naja kaouthia antivenin and neutralization by N. kaouthia neurotoxin-specific human ScFv.The differential regulation of human ACT1 isoforms by Hsp90 in IL-17 signaling Asteropsins B-D, sponge-derived knottins with potential utility as a novel scaffold for oral peptide drugs Comparative structural analysis of haemagglutinin proteins from type A influenza viruses: conserved and variable features.

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Improving the physical realism and structural accuracy of protein models by a two-step atomic-level energy minimization

http://www.wikidata.org/entity/Q24626539

description

2011 nî lūn-bûn

@nan

2011 թուականի Նոյեմբերին հրատարակուած գիտական յօդուած

@hyw

2011 թվականի նոյեմբերին հրատարակված գիտական հոդված

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2011年の論文

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2011年論文

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2011年論文

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2011年論文

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2011年論文

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2011年論文

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2011年论文

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name

Improving the physical realism ...... omic-level energy minimization

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Improving the physical realism ...... omic-level energy minimization

@en

Improving the physical realism ...... omic-level energy minimization

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type

label

Improving the physical realism ...... omic-level energy minimization

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Improving the physical realism ...... omic-level energy minimization

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Improving the physical realism ...... omic-level energy minimization

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prefLabel

Improving the physical realism ...... omic-level energy minimization

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Improving the physical realism ...... omic-level energy minimization

@en

Improving the physical realism ...... omic-level energy minimization

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J.BPJ.2011.10.024

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Biophysical Journal

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Improving the physical realism ...... omic-level energy minimization

@en

P2093

Dong Xu

http://www.w3.org/2001/XMLSchema#string

Yang Zhang

http://www.w3.org/2001/XMLSchema#string

P2860

The other 90% of the protein: assessment beyond the Calphas for CASP8 template-based and high-accuracy models.

I-TASSER: a unified platform for automated protein structure and function prediction

Improved prediction of protein side-chain conformations with SCWRL4

MUSTER: Improving protein sequence profile-profile alignments by using multiple sources of structure information

MolProbity: all-atom structure validation for macromolecular crystallography

LGA: A method for finding 3D similarities in protein structures

LOMETS: a local meta-threading-server for protein structure prediction

Structure validation by Calpha geometry: phi,psi and Cbeta deviation

Comparative protein modelling by satisfaction of spatial restraints

Satisfying hydrogen bonding potential in proteins

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302330

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10.1016/J.BPJ.2011.10.024

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22098752

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