Metscape: a Cytoscape plug-in for visualizing and interpreting metabolomic data in the context of human metabolic networks - Wikidata - awgldk - TriplyDB

Metscape: a Cytoscape plug-in for visualizing and interpreting metabolomic data in the context of human metabolic networks

Metscape: a Cytoscape plug-in for visualizing and interpreting metabolomic data in the context of human metabolic networks

http://www.wikidata.org/entity/Q24614450

about

Translational biomarker discovery in clinical metabolomics: an introductory tutorial MetaboAnalyst 2.0--a comprehensive server for metabolomic data analysis MarVis-Pathway: integrative and exploratory pathway analysis of non-targeted metabolomics data kpath: integration of metabolic pathway linked data Identification of cisplatin-regulated metabolic pathways in pluripotent stem cells Biological network exploration with Cytoscape 3 Systems biology analysis reveals role of MDM2 in diabetic nephropathy A travel guide to Cytoscape plugins.Analyzing LC/MS metabolic profiling data in the context of existing metabolic networks.Construction and analysis of correlation networks based on gas chromatography-mass spectrometry metabonomics data for lipopolysaccharide-induced inflammation and intervention with volatile oil from Angelica sinensis in rats.Metabolomic analysis and visualization engine for LC-MS data.Metabolomics Identifies Metabolic Markers of Maturation in Human Pluripotent Stem Cell-Derived Cardiomyocytes.Metabolomics of ApcMin/+ mice genetically susceptible to intestinal cancer Metscape 2 bioinformatics tool for the analysis and visualization of metabolomics and gene expression data.Metabolic reprogramming induced by ketone bodies diminishes pancreatic cancer cachexia.Bioinformatics Tools for Mass Spectroscopy-Based Metabolomic Data Processing and Analysis.Remodeling of central metabolism in invasive breast cancer compared to normal breast tissue - a GC-TOFMS based metabolomics study.Current advances in systems and integrative biology Metabolic consequences of sepsis-induced acute lung injury revealed by plasma ¹H-nuclear magnetic resonance quantitative metabolomics and computational analysis Serum metabolomic profiling in acute alcoholic hepatitis identifies multiple dysregulated pathways Predicting network activity from high throughput metabolomics.Characterization of the usage of the serine metabolic network in human cancer Impact of anesthesia and euthanasia on metabolomics of mammalian tissues: studies in a C57BL/6J mouse model.Analytical methods in untargeted metabolomics: state of the art in 2015.Predicting the in vivo mechanism of action for drug leads using NMR metabolomics Revisiting Protocols for the NMR Analysis of Bacterial Metabolomes The NIH National Center for Integrative Biomedical Informatics (NCIBI).MetaMapR: pathway independent metabolomic network analysis incorporating unknowns Acute Exposure to Pacific Ciguatoxin Reduces Electroencephalogram Activity and Disrupts Neurotransmitter Metabolic Pathways in Motor Cortex.Deletion of glycerol channel aquaporin-9 (Aqp9) impairs long-term blood glucose control in C57BL/6 leptin receptor-deficient (db/db) obese mice.System-wide assembly of pathways and modules hierarchically reveal metabolic mechanism of cerebral ischemia Metabolomics reveals differential levels of oral metabolites in HIV-infected patients: toward novel diagnostic targets A causal network analysis in an observational study identifies metabolomics pathways influencing plasma triglyceride levels Kidney Tissue Targeted Metabolic Profiling of Unilateral Ureteral Obstruction Rats by NMR Crossing the Boundaries of Our Current Healthcare System by Integrating Ultra-Weak Photon Emissions with Metabolomics.Integrative modelling of tumour DNA methylation quantifies the contribution of metabolism A Comprehensive Analysis of Metabolomics and Transcriptomics in Cervical Cancer.Computational tools for the secondary analysis of metabolomics experiments.Design and analysis of metabolomics studies in epidemiologic research: a primer on -omic technologies.Combined transcriptome and metabolome analyses of metformin effects reveal novel links between metabolic networks in steroidogenic systems.

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Metscape: a Cytoscape plug-in for visualizing and interpreting metabolomic data in the context of human metabolic networks

http://www.wikidata.org/entity/Q24614450

description

2010 nî lūn-bûn

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2010 թուականի Ապրիլին հրատարակուած գիտական յօդուած

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Alla Karnovsky

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Christopher W Beecher

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James D Cavalcoli

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Terry E Weymouth

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V Glenn Tarcea

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P2860

Cytoscape: a software environment for integrated models of biomolecular interaction networks

From genomics to chemical genomics: new developments in KEGG

KEGG Atlas mapping for global analysis of metabolic pathways

HMDB: a knowledgebase for the human metabolome

Michigan molecular interactions r2: from interacting proteins to pathways

BRENDA, AMENDA and FRENDA the enzyme information system: new content and tools in 2009

A new dynamical layout algorithm for complex biochemical reaction networks.

Supporting cognition in systems biology analysis: findings on users' processes and design implications.

Metabolic network visualization eliminating node redundance and preserving metabolic pathways.

The Pathway Tools cellular overview diagram and Omics Viewer

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Charles F. Burant

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