Genome-wide transcriptome analysis of the plant pathogen Xanthomonas identifies sRNAs with putative virulence functions - Wikidata - awgldk - TriplyDB

Genome-wide transcriptome analysis of the plant pathogen Xanthomonas identifies sRNAs with putative virulence functions

Genome-wide transcriptome analysis of the plant pathogen Xanthomonas identifies sRNAs with putative virulence functions

http://www.wikidata.org/entity/Q24618137

about

Small RNA sX13: a multifaceted regulator of virulence in the plant pathogen Xanthomonas Genome-wide transcription start site mapping of Bradyrhizobium japonicum grown free-living or in symbiosis - a rich resource to identify new transcripts, proteins and to study gene regulation High-resolution transcriptome maps reveal strain-specific regulatory features of multiple Campylobacter jejuni isolates dRNA-Seq Reveals Genomewide TSSs and Noncoding RNAs of Plant Beneficial Rhizobacterium Bacillus amyloliquefaciens FZB42 Use of siRNA molecular beacons to detect and attenuate mycobacterial infection in macrophages Diverse Functions of Small RNAs in Different Plant-Pathogen Communications Genome-wide identification of Hfq-regulated small RNAs in the fire blight pathogen Erwinia amylovora discovered small RNAs with virulence regulatory function Aconitase B is required for optimal growth of Xanthomonas campestris pv. vesicatoria in pepper plants Base pairing interaction between 5'- and 3'-UTRs controls icaR mRNA translation in Staphylococcus aureus Genomics and transcriptomics of Xanthomonas campestris species challenge the concept of core type III effectome TSSAR: TSS annotation regime for dRNA-seq data.Bioinformatics of prokaryotic RNAs Genome-wide transcriptomic analysis reveals correlation between higher WRKY61 expression and reduced symptom severity in Turnip crinkle virus infected Arabidopsis thaliana Primary transcriptome map of the hyperthermophilic archaeon Thermococcus kodakarensis The periplasmic HrpB1 protein from Xanthomonas spp. binds to peptidoglycan and to components of the type III secretion system.Mapping the RNA-Seq trash bin: unusual transcripts in prokaryotic transcriptome sequencing data.Transcript mapping based on dRNA-seq data.TraV: a genome context sensitive transcriptome browser RNA sequencing and proteogenomics reveal the importance of leaderless mRNAs in the radiation-tolerant bacterium Deinococcus deserti.The Streptococcus suis transcriptional landscape reveals adaptation mechanisms in pig blood and cerebrospinal fluid.Genome-Wide Detection of Small Regulatory RNAs in Deep-Sea Bacterium Shewanella piezotolerans WP3 Genome-wide transcriptional profiling of Botrytis cinerea genes targeting plant cell walls during infections of different hosts Transcriptomic profiling of Yersinia pseudotuberculosis reveals reprogramming of the Crp regulon by temperature and uncovers Crp as a master regulator of small RNAs.Genome sequence of Xanthomonas fuscans subsp. fuscans strain 4834-R reveals that flagellar motility is not a general feature of xanthomonads.Variable suites of non-effector genes are co-regulated in the type III secretion virulence regulon across the Pseudomonas syringae phylogeny.The post-transcriptional regulator rsmA/csrA activates T3SS by stabilizing the 5' UTR of hrpG, the master regulator of hrp/hrc genes, in Xanthomonas.Transcriptome analysis of thermophilic methylotrophic Bacillus methanolicus MGA3 using RNA-sequencing provides detailed insights into its previously uncharted transcriptional landscape Transcriptome analysis of the white pine blister rust pathogen Cronartium ribicola: de novo assembly, expression profiling, and identification of candidate effectors.Leaderless Transcripts and Small Proteins Are Common Features of the Mycobacterial Translational Landscape.Novel Essential Role of Ethanol Oxidation Genes at Low Temperature Revealed by Transcriptome Analysis in the Antarctic Bacterium Pseudomonas extremaustralis.High-resolution transcriptional analysis of the regulatory influence of cell-to-cell signalling reveals novel genes that contribute to Xanthomonas phytopathogenesis Small RNA-mediated regulation of host-pathogen interactions Current challenges in bacterial transcriptomics.Riboregulators and the role of Hfq in photosynthetic bacteria.Small non-coding RNAs in plant-pathogenic Xanthomonas spp.Transcriptome analysis reveals the host selection fitness mechanisms of the Rhizoctonia solani AG1IA pathogen.Small RNAs--the secret agents in the plant-pathogen interactions.Identification of new protein-coding genes with a potential role in the virulence of the plant pathogen Xanthomonas euvesicatoria.Bacterial spot of tomato and pepper: diverse Xanthomonas species with a wide variety of virulence factors posing a worldwide challenge.Comparative transcriptomics across the prokaryotic tree of life

P2860

Q21131371-D3E8EE7B-1185-457C-BA94-3308582F9123 Q24247657-4E7FAC65-39D8-4137-B277-65CAB5F203BC Q24489927-37CFA1B5-B1E9-43BD-B9AC-5A0F36075C59 Q24490214-2BD71B3E-44D4-4D30-9C60-BA39F5C8E800 Q26796753-8DFA3735-B12C-4C8F-9B84-52F147F54E5E Q28068223-A2F4EE14-A0D3-43CB-BE49-8C833681BA4F Q28241086-F2814253-D681-4B92-866B-F5B0F5BDB110 Q28482179-B09C241A-4438-4019-AEEE-722CC01CE4CD Q28537794-8F6D3996-B7E4-4C2F-9982-CE5E31FBD6BD Q28607226-1988B5A7-E40C-441E-BF5E-3F8AA42D0AC9 Q28655699-38B68FAE-D56D-49F9-86A9-A3CCE0B993CD Q28656061-753E9242-C9D9-4DF4-8D16-95D5354F5F64 Q28834616-1A12319A-343A-4E6E-AF74-D8BE5CF86F24 Q30017682-CB2C67AF-7E31-4002-9651-7E75E45688C1 Q30317752-99412A82-57AB-4B4E-86BC-871536EF0FA6 Q30631723-F19254E8-FD09-4D88-B306-5AA11DB213F7 Q30811190-4D7AA73B-5029-4CCA-A29B-52E228954A00 Q31157817-D6B6C98F-F5B4-4A56-8FA5-4CCD94B9D438 Q33556640-94F7EB4A-E469-439F-B497-5CA1B734C1E1 Q33626250-6022FE71-93DC-4FCE-8AD8-B1BA97C947CF Q33799810-31A07158-7CA0-44CB-AAC6-C80974D5679C Q34125852-95F2F6DE-4E58-4B62-A194-473369DA7666 Q34468976-B6AB8C2B-C94B-4182-8DAE-7264FE967DEF Q35032941-DDDE2788-1D48-4491-AC1A-B7696EB0280F Q35082188-B57DB0CC-460B-468A-A29F-B9CE8DF656FD Q35105638-336A3E4A-0F09-4F9D-9264-FA1721F224E1 Q35127840-84B5DF32-2AEC-43C3-B71A-4E8EA717783B Q35764295-B399866B-DCA2-400C-ADF1-2C1742F00489 Q35832097-998B0D73-A5D5-43DB-861D-2390D53E473D Q35869773-EBAE886A-C7F6-44A7-A096-287D98D2EF54 Q37098237-F890F342-B0A1-46B8-9E7D-0B6044676E3F Q37587009-C671B6EE-8758-4A9A-BF0E-1D7065A6DB56 Q38120750-085B5A7C-2CC8-4562-9BFB-BC35C5088599 Q38197832-11A221A4-F749-4D42-B057-870E3BCF7F12 Q38199304-685036E1-6FF7-4253-BDFC-3F8196638B5B Q38429122-095A5D3C-DBF7-4688-8E9B-EBC791BAD6B3 Q38540282-00D38A89-BD3C-453E-9784-2B9487BED1AD Q38621707-A4CFF3C1-326C-4831-890D-F246FD52333D Q39043495-DF7E7D91-B233-489A-A7AA-7E975E0BF922 Q39787416-8EB07323-25AF-4411-B2AF-7080E5D4A465

P2860

Genome-wide transcriptome analysis of the plant pathogen Xanthomonas identifies sRNAs with putative virulence functions

http://www.wikidata.org/entity/Q24618137

description

2012 nî lūn-bûn

@nan

2012 թուականի Մարտին հրատարակուած գիտական յօդուած

@hyw

2012 թվականի մարտին հրատարակված գիտական հոդված

@hy

2012年の論文

@ja

2012年論文

@yue

2012年論文

@zh-hant

2012年論文

@zh-hk

2012年論文

@zh-mo

2012年論文

@zh-tw

2012年论文

@wuu

name

Genome-wide transcriptome anal ...... h putative virulence functions

@ast

Genome-wide transcriptome anal ...... h putative virulence functions

@en

Genome-wide transcriptome anal ...... h putative virulence functions

@nl

type

label

Genome-wide transcriptome anal ...... h putative virulence functions

@ast

Genome-wide transcriptome anal ...... h putative virulence functions

@en

Genome-wide transcriptome anal ...... h putative virulence functions

@nl

prefLabel

Genome-wide transcriptome anal ...... h putative virulence functions

@ast

Genome-wide transcriptome anal ...... h putative virulence functions

@en

Genome-wide transcriptome anal ...... h putative virulence functions

@nl

P1433

Q24618137-520E118D-E53B-4FFB-B2E3-5872CC57B32E

P1476

Q24618137-5D04BF22-8750-4A13-9050-9F8A8FEB12F8

P2093

Q24618137-983BC2AB-DF37-4021-BAFA-A8CDA89AF9CB

Q24618137-E2AEEC20-4330-4BF3-9015-E4FFBD3C0C0F

Q24618137-EA2AEB98-3C32-49EA-8D61-9184ACB43FCF

Q24618137-F3D73824-6E0C-4090-86DD-4B4922211501

P2860

Q24618137-01D44F26-9570-4FB5-A871-D64A9F488F4C

Q24618137-04309A8F-4F54-4419-A6E3-54910B907A8E

Q24618137-04317BF7-A84E-435E-A839-BFAF3864F862

Q24618137-04B271EA-C3CD-4F33-B771-E7F6137F02D5

Q24618137-0616E019-F46F-40A9-8B95-92E6008EF612

Q24618137-0FC73613-A339-4002-BBFB-14B24034AAF7

Q24618137-1374F756-2CDF-4491-A73F-DCCAB537F3A1

Q24618137-14C00859-7C32-48F1-84D9-2B676A0AAB3C

Q24618137-17F64D30-F94A-488C-AD0A-7A65209F819E

Q24618137-2113DBEE-4B6E-47A2-85B5-B4C0F8FAF16C

P304

Q24618137-815B3F1C-AD6A-45FA-A20D-084940E58882

P31

Q24618137-90F33E4E-47E0-416F-B15E-987726787180

P3181

Q24618137-4AA225DF-5DF4-4A13-B877-66A3E0A4F71B

P356

Q24618137-0D606125-09D4-4544-A02E-023AC2ECAB01

P407

Q24618137-5B047616-4B61-4769-95FB-9A9014529C75

P433

Q24618137-D21D6A26-0C90-430C-87FF-873EA769A9F9

P478

Q24618137-011EA537-112B-45D0-8A70-F57CA144A61B

P50

Q24618137-00004D3B-4DA0-4861-AF7A-832E66CA4143

Q24618137-4227A262-D7D1-4472-98C9-9EC80EE2BC97

Q24618137-DA4CA944-A4BD-4984-A869-87FA94978B3F

Q24618137-FF1218D3-20B8-46A9-8122-9C6B3D08323D

P577

Q24618137-86B6973A-09AD-45FD-9E1F-30EB54B40CEE

P5875

Q24618137-296FFFD8-318B-4A27-84F3-927ADF8FC1F2

P698

Q24618137-F7DB7D83-AD80-49D8-BDC6-E3639EC8EA1E

P921

Q24618137-435832B0-6173-48E1-87BE-064706AA74A4

Q24618137-C2C7FBA9-A683-4367-A701-DE978E376522

P932

Q24618137-886E0D81-7020-4029-A5C7-27EF3B505A38

P3181

P356

P1433

Nucleic Acids Research

P1476

Genome-wide transcriptome anal ...... h putative virulence functions

@en

P2093

Cornelius Schmidtke

http://www.w3.org/2001/XMLSchema#string

Juliane Kuhfuss

http://www.w3.org/2001/XMLSchema#string

Steve Hoffmann

http://www.w3.org/2001/XMLSchema#string

Sven Findeiss

http://www.w3.org/2001/XMLSchema#string

P2860

A genome-wide survey of sRNAs in the symbiotic nitrogen-fixing alpha-proteobacterium Sinorhizobium meliloti

Two seemingly homologous noncoding RNAs act hierarchically to activate glmS mRNA translation

Genomes of three tomato pathogens within the Ralstonia solanacearum species complex reveal significant evolutionary divergence

Fast mapping of short sequences with mismatches, insertions and deletions using index structures

Inferring noncoding RNA families and classes by means of genome-scale structure-based clustering

Insights into Genome Plasticity and Pathogenicity of the Plant Pathogenic Bacterium Xanthomonas campestris pv. vesicatoria Revealed by the Complete Genome Sequence

Comparison of the genomes of two Xanthomonas pathogens with differing host specificities

New RNA motifs suggest an expanded scope for riboswitches in bacterial genetic control

Replication of an origin-containing derivative of plasmid RK2 dependent on a plasmid function provided in trans

Rfam: Wikipedia, clans and the "decimal" release

P304

2020-31

http://www.w3.org/2001/XMLSchema#string

P31

scholarly article

P3181

1806646

http://www.w3.org/2001/XMLSchema#string

P356

10.1093/NAR/GKR904

http://www.w3.org/2001/XMLSchema#string

P407

P433

5

http://www.w3.org/2001/XMLSchema#string

P478

40

http://www.w3.org/2001/XMLSchema#string

P50

Peter F. Stadler

P577

2012-03-01T00:00:00Z

http://www.w3.org/2001/XMLSchema#dateTime

P5875

51796083

http://www.w3.org/2001/XMLSchema#string

P698

22080557

http://www.w3.org/2001/XMLSchema#string

P921

P932

3300014

http://www.w3.org/2001/XMLSchema#string