Evolutionary dynamics of Clostridium difficile over short and long time scales - Wikidata - awgldk - TriplyDB

Evolutionary dynamics of Clostridium difficile over short and long time scales

Evolutionary dynamics of Clostridium difficile over short and long time scales

http://www.wikidata.org/entity/Q24622076

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Patterns of gene flow define species of thermophilic Archaea Microevolutionary analysis of Clostridium difficile genomes to investigate transmission Recent advances in the understanding of antibiotic resistance in Clostridium difficile infection Disruption of the Gut Microbiome: Clostridium difficile Infection and the Threat of Antibiotic Resistance Murine models to study Clostridium difficile infection and transmission Insights from genomic comparisons of genetically monomorphic bacterial pathogens Emerging insights on intestinal dysbiosis during bacterial infections Ultrafast evolution and loss of CRISPRs following a host shift in a novel wildlife pathogen, Mycoplasma gallisepticum Bacterial epidemiology and biology - lessons from genome sequencing Analysis of the Core Genome and Pan-Genome of Autotrophic Acetogenic Bacteria Diversity and Evolution in the Genome of Clostridium difficile Variations in TcdB activity and the hypervirulence of emerging strains of Clostridium difficile Insights from genomics into bacterial pathogen populations Comparative metagenomics of biogas-producing microbial communities from production-scale biogas plants operating under wet or dry fermentation conditions Culture-independence for surveillance and epidemiology Short-term genome stability of serial Clostridium difficile ribotype 027 isolates in an experimental gut model and recurrent human disease Detection of mixed infection from bacterial whole genome sequence data allows assessment of its role in Clostridium difficile transmission The impact of recombination on dN/dS within recently emerged bacterial clones Chlamydiaceae Genomics Reveals Interspecies Admixture and the Recent Evolution of Chlamydia abortus Infecting Lower Mammalian Species and Humans The complexity and diversity of the Pathogenicity Locus in Clostridium difficile clade 5 Evolution, genomics and epidemiology of Pseudomonas syringae: Challenges in Bacterial Molecular Plant Pathology.Acquisition and evolution of SXT-R391 integrative conjugative elements in the seventh-pandemic Vibrio cholerae lineage.Genetic characterisation of Malawian pneumococci prior to the roll-out of the PCV13 vaccine using a high-throughput whole genome sequencing approach Intracontinental spread of human invasive Salmonella Typhimurium pathovariants in sub-Saharan Africa.Two-step source tracing strategy of Yersinia pestis and its historical epidemiology in a specific region.Functional genomics reveals that Clostridium difficile Spo0A coordinates sporulation, virulence and metabolism Analysis of ultra low genome conservation in Clostridium difficile.The Clostridium difficile cell wall protein CwpV is antigenically variable between strains, but exhibits conserved aggregation-promoting function Identification and characterization of glycoproteins on the spore surface of Clostridium difficile Clinical Clostridium difficile: clonality and pathogenicity locus diversity.Genetic organisation, mobility and predicted functions of genes on integrated, mobile genetic elements in sequenced strains of Clostridium difficile.The plant pathogen Pseudomonas syringae pv. tomato is genetically monomorphic and under strong selection to evade tomato immunity.The anti-sigma factor TcdC modulates hypervirulence in an epidemic BI/NAP1/027 clinical isolate of Clostridium difficile.Hypervirulent Clostridium difficile PCR-ribotypes exhibit resistance to widely used disinfectants Recombination drives evolution of the Clostridium difficile 16S-23S rRNA intergenic spacer region Macro and micro diversity of Clostridium difficile isolates from diverse sources and geographical locations.Clostridium and bacillus binary enterotoxins: bad for the bowels, and eukaryotic being.Diverse temperate bacteriophage carriage in Clostridium difficile 027 strains.Prophage carriage and diversity within clinically relevant strains of Clostridium difficile A novel multivalent, single-domain antibody targeting TcdA and TcdB prevents fulminant Clostridium difficile infection in mice.

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Evolutionary dynamics of Clostridium difficile over short and long time scales

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2010 nî lūn-bûn

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2010 թուականի Ապրիլին հրատարակուած գիտական յօդուած

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2010 թվականի ապրիլին հրատարակված գիտական հոդված

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2010年の論文

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2010年論文

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2010年論文

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2010年論文

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2010年論文

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2010年论文

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Evolutionary dynamics of Clostridium difficile over short and long time scales

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Evolutionary dynamics of Clostridium difficile over short and long time scales

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Evolutionary dynamics of Clostridium difficile over short and long time scales

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Evolutionary dynamics of Clostridium difficile over short and long time scales

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Evolutionary dynamics of Clostridium difficile over short and long time scales

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Evolutionary dynamics of Clostridium difficile over short and long time scales

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Evolutionary dynamics of Clostridium difficile over short and long time scales

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Evolutionary dynamics of Clostridium difficile over short and long time scales

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Evolutionary dynamics of Clostridium difficile over short and long time scales

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Proceedings of the National Academy of Sciences of the United States of America

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Evolutionary dynamics of Clostridium difficile over short and long time scales

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Christine Burrows

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Craig Corton

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Helena M B Seth-Smith

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Melissa J Martin

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Miao He

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P2860

The population genetics of dN/dS

Mapping short DNA sequencing reads and calling variants using mapping quality scores

Improved tools for biological sequence comparison.

Versatile and open software for comparing large genomes

Simple methods for estimating the numbers of synonymous and nonsynonymous nucleotide substitutions

BEAST: Bayesian evolutionary analysis by sampling trees.

RAxML-VI-HPC: maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models

PAML 4: phylogenetic analysis by maximum likelihood

A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood

Artemis: sequence visualization and annotation

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Julian Parkhill

Richard Stabler

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Stephen D Bentley

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Clostridium difficile

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