De novo assembly using low-coverage short read sequence data from the rice pathogen Pseudomonas syringae pv. oryzae
about
Whole genome amplification and de novo assembly of single bacterial cells.Optimizing hybrid assembly of next-generation sequence data from Enterococcus faecium: a microbe with highly divergent genomeComparison of next-generation sequencing systemsA practical comparison of de novo genome assembly software tools for next-generation sequencing technologiesOptimization of de novo transcriptome assembly from next-generation sequencing dataCommonalities and differences of T3SSs in rhizobia and plant pathogenic bacteriaAssemblathon 2: evaluating de novo methods of genome assembly in three vertebrate speciesExtensive remodeling of the Pseudomonas syringae pv. avellanae type III secretome associated with two independent host shifts onto hazelnutEvaluation of methods for de novo genome assembly from high-throughput sequencing reads reveals dependencies that affect the quality of the resultsLibrary preparation and data analysis packages for rapid genome sequencingNext-generation sequence assembly: four stages of data processing and computational challengesBioinformatics for next generation sequencing data.Dynamic evolution of pathogenicity revealed by sequencing and comparative genomics of 19 Pseudomonas syringae isolatesA draft genome sequence and functional screen reveals the repertoire of type III secreted proteins of Pseudomonas syringae pathovar tabaci 11528Parallel, tag-directed assembly of locally derived short sequence readsAssembly algorithms for next-generation sequencing data.De novo assembly of a 40 Mb eukaryotic genome from short sequence reads: Sordaria macrospora, a model organism for fungal morphogenesis.Whole genome assembly of a natto production strain Bacillus subtilis natto from very short read data.Comparative genome analysis provides insights into the evolution and adaptation of Pseudomonas syringae pv. aesculi on Aesculus hippocastanum.Analysis of plant microbe interactions in the era of next generation sequencing technologies.SOLiD sequencing of four Vibrio vulnificus genomes enables comparative genomic analysis and identification of candidate clade-specific virulence genesHost-microbe interaction systems biology: lifecycle transcriptomics and comparative genomics.Arabidopsis and the plant immune systemGenome sequence analyses of Pseudomonas savastanoi pv. glycinea and subtractive hybridization-based comparative genomics with nine pseudomonads.Using genomic sequencing for classical genetics in E. coli K12.The extent of genome flux and its role in the differentiation of bacterial lineages.Large-scale transcriptome analysis in chickpea (Cicer arietinum L.), an orphan legume crop of the semi-arid tropics of Asia and Africa.Emerging knowledge from genome sequencing of crop species.The genome sequence of the North-European cucumber (Cucumis sativus L.) unravels evolutionary adaptation mechanisms in plants.A hybrid approach for the automated finishing of bacterial genomesUse of low-coverage, large-insert, short-read data for rapid and accurate generation of enhanced-quality draft Pseudomonas genome sequencesPseudomonas syringae pv. actinidiae draft genomes comparison reveal strain-specific features involved in adaptation and virulence to Actinidia species.Plantagora: modeling whole genome sequencing and assembly of plant genomes.A new strategy for better genome assembly from very short reads.Next-generation sequencing techniques for eukaryotic microorganisms: sequencing-based solutions to biological problems.A cost-effective and universal strategy for complete prokaryotic genomic sequencing proposed by computer simulation.Population genomics and local adaptation in wild isolates of a model microbial eukaryoteAlignment-free design of highly discriminatory diagnostic primer sets for Escherichia coli O104:H4 outbreak strains.Exploration of multivariate analysis in microbial coding sequence modeling.Genomics-Based Exploration of Virulence Determinants and Host-Specific Adaptations of Pseudomonas syringae Strains Isolated from Grasses
P2860
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P2860
De novo assembly using low-coverage short read sequence data from the rice pathogen Pseudomonas syringae pv. oryzae
description
2009 nî lūn-bûn
@nan
2009 թուականի Փետրուարին հրատարակուած գիտական յօդուած
@hyw
2009 թվականի փետրվարին հրատարակված գիտական հոդված
@hy
2009年の論文
@ja
2009年論文
@yue
2009年論文
@zh-hant
2009年論文
@zh-hk
2009年論文
@zh-mo
2009年論文
@zh-tw
2009年论文
@wuu
name
De novo assembly using low-cov ...... seudomonas syringae pv. oryzae
@ast
De novo assembly using low-cov ...... seudomonas syringae pv. oryzae
@en
De novo assembly using low-cov ...... seudomonas syringae pv. oryzae
@nl
type
label
De novo assembly using low-cov ...... seudomonas syringae pv. oryzae
@ast
De novo assembly using low-cov ...... seudomonas syringae pv. oryzae
@en
De novo assembly using low-cov ...... seudomonas syringae pv. oryzae
@nl
prefLabel
De novo assembly using low-cov ...... seudomonas syringae pv. oryzae
@ast
De novo assembly using low-cov ...... seudomonas syringae pv. oryzae
@en
De novo assembly using low-cov ...... seudomonas syringae pv. oryzae
@nl
P2860
P50
P356
P1433
P1476
De novo assembly using low-cov ...... seudomonas syringae pv. oryzae
@en
P2093
Corbin D Jones
Jeffery L Dangl
P2860
P304
P356
10.1101/GR.083311.108
P407
P577
2009-02-01T00:00:00Z