SHARCGS, a fast and highly accurate short-read assembly algorithm for de novo genomic sequencing - Wikidata - awgldk - TriplyDB

SHARCGS, a fast and highly accurate short-read assembly algorithm for de novo genomic sequencing

SHARCGS, a fast and highly accurate short-read assembly algorithm for de novo genomic sequencing

http://www.wikidata.org/entity/Q24672027

about

ConDeTri--a content dependent read trimmer for Illumina data Optimizing hybrid assembly of next-generation sequence data from Enterococcus faecium: a microbe with highly divergent genome A practical comparison of de novo genome assembly software tools for next-generation sequencing technologies Ray: simultaneous assembly of reads from a mix of high-throughput sequencing technologies De novo assembly using low-coverage short read sequence data from the rice pathogen Pseudomonas syringae pv. oryzae Annotating genomes with massive-scale RNA sequencing De novo assembly of human genomes with massively parallel short read sequencing Velvet: algorithms for de novo short read assembly using de Bruijn graphs The A, C, G, and T of Genome Assembly Challenges, Solutions, and Quality Metrics of Personal Genome Assembly in Advancing Precision Medicine Survey of Programs Used to Detect Alternative Splicing Isoforms from Deep Sequencing Data In Silico The impact of next-generation sequencing technology on genetics Genome enablement of the notothenioidei: genome size estimates from 11 species and BAC libraries from 2 representative taxa Comparing de novo genome assembly: the long and short of it Evaluation of methods for de novo genome assembly from high-throughput sequencing reads reveals dependencies that affect the quality of the results ABySS: a parallel assembler for short read sequence data Substantial biases in ultra-short read data sets from high-throughput DNA sequencing Paired-end sequencing of long-range DNA fragments for de novo assembly of large, complex Mammalian genomes by direct intra-molecule ligation Next-generation sequence assembly: four stages of data processing and computational challenges A memory-efficient algorithm to obtain splicing graphs and de novo expression estimates from de Bruijn graphs of RNA-Seq data Sequence assembly using next generation sequencing data--challenges and solutions.BOAT: Basic Oligonucleotide Alignment Tool Parallel short sequence assembly of transcriptomes Finding optimal threshold for correction error reads in DNA assembling Crystallizing short-read assemblies around seeds.Short read DNA fragment anchoring algorithm QSRA: a quality-value guided de novo short read assembler.Integrating sequencing technologies in personal genomics: optimal low cost reconstruction of structural variants Comparison of next generation sequencing technologies for transcriptome characterization.A draft genome sequence and functional screen reveals the repertoire of type III secreted proteins of Pseudomonas syringae pathovar tabaci 11528 PAVE: program for assembling and viewing ESTs Novel software package for cross-platform transcriptome analysis (CPTRA).Large scale single nucleotide polymorphism discovery in unsequenced genomes using second generation high throughput sequencing technology: applied to turkey.Pebble and rock band: heuristic resolution of repeats and scaffolding in the velvet short-read de novo assembler Assembly complexity of prokaryotic genomes using short reads.Assembly algorithms for next-generation sequencing data.Whole genome assembly of a natto production strain Bacillus subtilis natto from very short read data.Cost-effective sequencing of full-length cDNA clones powered by a de novo-reference hybrid assembly RNA-seq: from technology to biology.TagCleaner: Identification and removal of tag sequences from genomic and metagenomic datasets

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SHARCGS, a fast and highly accurate short-read assembly algorithm for de novo genomic sequencing

http://www.wikidata.org/entity/Q24672027

description

2007 nî lūn-bûn

@nan

2007 թուականի Նոյեմբերին հրատարակուած գիտական յօդուած

@hyw

2007 թվականի նոյեմբերին հրատարակված գիտական հոդված

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2007年の論文

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2007年論文

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2007年論文

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2007年論文

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2007年論文

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2007年論文

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2007年论文

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name

SHARCGS, a fast and highly acc ...... for de novo genomic sequencing

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SHARCGS, a fast and highly acc ...... for de novo genomic sequencing

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SHARCGS, a fast and highly acc ...... for de novo genomic sequencing

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SHARCGS, a fast and highly acc ...... for de novo genomic sequencing

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SHARCGS, a fast and highly acc ...... for de novo genomic sequencing

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SHARCGS, a fast and highly acc ...... for de novo genomic sequencing

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SHARCGS, a fast and highly acc ...... for de novo genomic sequencing

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SHARCGS, a fast and highly acc ...... for de novo genomic sequencing

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SHARCGS, a fast and highly acc ...... for de novo genomic sequencing

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Genome Research

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SHARCGS, a fast and highly acc ...... for de novo genomic sequencing

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Claudio Lottaz

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Juliane C Dohm

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Tatiana Borodina

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P2860

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ARACHNE: a whole-genome shotgun assembler

Base-calling of automated sequencer traces using phred. II. Error probabilities

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10.1101/GR.6435207

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11

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17

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Heinz Himmelbauer

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5935880

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