Identification of 22 candidate structured RNAs in bacteria using the CMfinder comparative genomics pipeline
about
Comparative genomics reveals 104 candidate structured RNAs from bacteria, archaea, and their metagenomesThe distributions, mechanisms, and structures of metabolite-binding riboswitchesIdentification of candidate structured RNAs in the marine organism 'Candidatus Pelagibacter ubique'Identification of a chitin-induced small RNA that regulates translation of the tfoX gene, encoding a positive regulator of natural competence in Vibrio choleraeRegulatory RNAs in bacteriaEvidence for widespread gene control function by the ydaO riboswitch candidateBacterial aptamers that selectively bind glutamineA eubacterial riboswitch class that senses the coenzyme tetrahydrofolateTranscriptome analysis of Pseudomonas syringae identifies new genes, noncoding RNAs, and antisense activityRecognition of the bacterial second messenger cyclic diguanylate by its cognate riboswitchChallenges of ligand identification for riboswitch candidatesNew families of human regulatory RNA structures identified by comparative analysis of vertebrate genomesThe aptamer core of SAM-IV riboswitches mimics the ligand-binding site of SAM-I riboswitchesSmall non-coding RNAs in Streptomyces coelicolorA widespread riboswitch candidate that controls bacterial genes involved in molybdenum cofactor and tungsten cofactor metabolismRiboswitches that sense S-adenosylhomocysteine and activate genes involved in coenzyme recyclingConfirmation of a second natural preQ1 aptamer class in Streptococcaceae bacteriaA variant riboswitch aptamer class for S-adenosylmethionine common in marine bacteriaRiboswitch control of gene expression in plants by splicing and alternative 3' end processing of mRNAsGuanine riboswitch variants from Mesoplasma florum selectively recognize 2'-deoxyguanosineMechanism of mRNA destabilization by the glmS ribozymeCyclic di-GMP: the first 25 years of a universal bacterial second messengerThe roles of metal ions in regulation by riboswitchesA decade of riboswitchesMetabolite sensing in eukaryotic mRNA biologyComputational analysis of noncoding RNAsCues and regulatory pathways involved in natural competence and transformation in pathogenic and environmental Gram-negative bacteriaA Structural Basis for the Recognition of 2′-Deoxyguanosine by the Purine RiboswitchStructural and Biochemical Determinants of Ligand Binding by the c-di-GMP Riboswitch,Structure of a class II preQ1 riboswitch reveals ligand recognition by a new foldStructure and function of preQ1 riboswitchesComplex riboswitchesNatural transformation of Vibrio fischeri requires tfoX and tfoYA genome-wide survey of highly expressed non-coding RNAs and biological validation of selected candidates in Agrobacterium tumefaciensMultiple conformations are a conserved and regulatory feature of the RB1 5' UTRProspects for riboswitch discovery and analysisDiscovery and validation of novel and distinct RNA regulators for ribosomal protein S15 in diverse bacterial phylaCommon themes and differences in SAM recognition among SAM riboswitchesPromoter reuse in prokaryotesNon-coding RNA and its potential role in Mycobacterium tuberculosis pathogenesis
P2860
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P2860
Identification of 22 candidate structured RNAs in bacteria using the CMfinder comparative genomics pipeline
description
2007 nî lūn-bûn
@nan
2007 թուականին հրատարակուած գիտական յօդուած
@hyw
2007 թվականին հրատարակված գիտական հոդված
@hy
2007年の論文
@ja
2007年論文
@yue
2007年論文
@zh-hant
2007年論文
@zh-hk
2007年論文
@zh-mo
2007年論文
@zh-tw
2007年论文
@wuu
name
Identification of 22 candidate ...... comparative genomics pipeline
@ast
Identification of 22 candidate ...... comparative genomics pipeline
@en
Identification of 22 candidate ...... comparative genomics pipeline
@nl
type
label
Identification of 22 candidate ...... comparative genomics pipeline
@ast
Identification of 22 candidate ...... comparative genomics pipeline
@en
Identification of 22 candidate ...... comparative genomics pipeline
@nl
prefLabel
Identification of 22 candidate ...... comparative genomics pipeline
@ast
Identification of 22 candidate ...... comparative genomics pipeline
@en
Identification of 22 candidate ...... comparative genomics pipeline
@nl
P2093
P2860
P3181
P356
P1476
Identification of 22 candidate ...... comparative genomics pipeline
@en
P2093
Elaine R Lee
Jane N Kim
Jeffrey E Barrick
Jeremy Gore
Joy Xin Wang
Kirsten F Block
Martin Tompa
Narasimhan Sudarsan
Ronald R Breaker
P2860
P304
P3181
P356
10.1093/NAR/GKM487
P407
P577
2007-01-01T00:00:00Z