Structure prediction for CASP7 targets using extensive all-atom refinement with Rosetta@home - Wikidata - awgldk - TriplyDB

Structure prediction for CASP7 targets using extensive all-atom refinement with Rosetta@home

Structure prediction for CASP7 targets using extensive all-atom refinement with Rosetta@home

http://www.wikidata.org/entity/Q28250601

about

Protein 3D structure computed from evolutionary sequence variation The FEATURE framework for protein function annotation: modeling new functions, improving performance, and extending to novel applications The roles of entropy and kinetics in structure prediction Progress and challenges in protein structure prediction Ab initio protein modelling reveals novel human MIT domains Template-based protein structure modeling I-TASSER: a unified platform for automated protein structure and function prediction High-resolution structure prediction and the crystallographic phase problem NMR structure of a 4 x 4 nucleotide RNA internal loop from an R2 retrotransposon: Identification of a three purine-purine sheared pair motif and comparison to MC-SYM predictions Crowdsourcing biomedical research: leveraging communities as innovation engines Molecular biology, genetics and biochemistry of the repulsive guidance molecule family Conservation, variability and the modeling of active protein kinases Understanding the mechanism of atovaquone drug resistance in Plasmodium falciparum cytochrome b mutation Y268S using computational methods ROSETTA3: an object-oriented software suite for the simulation and design of macromolecules One contact for every twelve residues allows robust and accurate topology-level protein structure modeling Delaunay-based nonlocal interactions are sufficient and accurate in protein fold recognition.Mass spectrometry coupled experiments and protein structure modeling methods.Improving fragment quality for de novo structure prediction.A multi-template combination algorithm for protein comparative modeling.Local descriptors of protein structure: a systematic analysis of the sequence-structure relationship in proteins using short- and long-range interactions Improved cryoEM-Guided Iterative Molecular Dynamics--Rosetta Protein Structure Refinement Protocol for High Precision Protein Structure Prediction.Protein structure prediction and model quality assessment Generalized ensemble methods for de novo structure prediction.Protein structure prediction: when is it useful?PROCAIN: protein profile comparison with assisting information.Identifying native-like protein structures with scoring functions based on all-atom ECEPP force fields, implicit solvent models and structure relaxation Discrete-continuous duality of protein structure space.Sampling bottlenecks in de novo protein structure prediction Structure prediction for CASP8 with all-atom refinement using Rosetta.I-TASSER: fully automated protein structure prediction in CASP8 Ultra-High-Throughput Structure-Based Virtual Screening for Small-Molecule Inhibitors of Protein-Protein Interactions.Prediction of structures of zinc-binding proteins through explicit modeling of metal coordination geometry.Feature space resampling for protein conformational search.Practically useful: what the Rosetta protein modeling suite can do for you Addressing the Role of Conformational Diversity in Protein Structure Prediction Recognizing protein substructure similarity using segmental threading.Reliable protein structure refinement using a physical energy function.RosettaEPR: an integrated tool for protein structure determination from sparse EPR data.Alternate states of proteins revealed by detailed energy landscape mapping Incorporation of local structural preference potential improves fold recognition.

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P2860

Structure prediction for CASP7 targets using extensive all-atom refinement with Rosetta@home

http://www.wikidata.org/entity/Q28250601

description

2007 nî lūn-bûn

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2007 թուականին հրատարակուած գիտական յօդուած

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2007 թվականին հրատարակված գիտական հոդված

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2007年の論文

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Structure prediction for CASP7 ...... m refinement with Rosetta@home

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Structure prediction for CASP7 ...... m refinement with Rosetta@home

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Structure prediction for CASP7 ...... m refinement with Rosetta@home

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Structure prediction for CASP7 ...... m refinement with Rosetta@home

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Structure prediction for CASP7 ...... m refinement with Rosetta@home

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Structure prediction for CASP7 ...... m refinement with Rosetta@home

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Structure prediction for CASP7 ...... m refinement with Rosetta@home

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Structure prediction for CASP7 ...... m refinement with Rosetta@home

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Structure prediction for CASP7 ...... m refinement with Rosetta@home

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Structure prediction for CASP7 ...... m refinement with Rosetta@home

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Andrew M Wollacott

http://www.w3.org/2001/XMLSchema#string

Bin Qian

http://www.w3.org/2001/XMLSchema#string

David E Kim

http://www.w3.org/2001/XMLSchema#string

Divya Bhat

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Dylan Chivian

http://www.w3.org/2001/XMLSchema#string

James Thompson

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Michael D Tyka

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Philip Bradley

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Robert Vernon

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Sagar Khare

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118-128

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scholarly article

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1781275

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10.1002/PROT.21636

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69 Suppl 8

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Lars Malmström

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2007-01-01T00:00:00Z

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5951040

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17894356

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