ROSETTA3: an object-oriented software suite for the simulation and design of macromolecules - Wikidata - awgldk - TriplyDB

ROSETTA3: an object-oriented software suite for the simulation and design of macromolecules

ROSETTA3: an object-oriented software suite for the simulation and design of macromolecules

http://www.wikidata.org/entity/Q28914720

about

Assembly of Ebola virus matrix protein VP40 is regulated by latch-like properties of N and C terminal tails Putting the pieces together: integrative modeling platform software for structure determination of macromolecular assemblies The deubiquitylase USP33 discriminates between RALB functions in autophagy and innate immune response A smoothed backbone-dependent rotamer library for proteins derived from adaptive kernel density estimates and regressions Structural and energetic basis of folded-protein transport by the FimD usher Determination of solution structures of proteins up to 40 kDa using CS-Rosetta with sparse NMR data from deuterated samples Protein Calligraphy: A New Concept Begins To Take Shape Principles and Overview of Sampling Methods for Modeling Macromolecular Structure and Dynamics Self-assembling protein nanoparticles in the design of vaccines Causes of evolutionary rate variation among protein sites Advances in structure-based vaccine design A review of metabolic and enzymatic engineering strategies for designing and optimizing performance of microbial cell factories Self-assembled bionanostructures: proteins following the lead of DNA nanostructures Structure-based Methods for Computational Protein Functional Site Prediction Adding diverse noncanonical backbones to rosetta: enabling peptidomimetic design QwikMD - Integrative Molecular Dynamics Toolkit for Novices and Experts.An Integrated Framework Advancing Membrane Protein Modeling and Design A pain-inducing centipede toxin targets the heat activation machinery of nociceptor TRPV1.Real-time PyMOL visualization for Rosetta and PyRosetta Structural and Functional Characterization of NikO, an Enolpyruvyl Transferase Essential in Nikkomycin Biosynthesis Computational Design of Catalytic Dyads and Oxyanion Holes for Ester Hydrolysis Spatial distribution of radiation damage to crystalline proteins at 25–300 K Oligomerization Propensity and Flexibility of Yeast Frataxin Studied by X-ray Crystallography and Small-Angle X-ray Scattering Vaccine Induction of Antibodies against a Structurally Heterogeneous Site of Immune Pressure within HIV-1 Envelope Protein Variable Regions 1 and 2 The Molecular Basis of Iron-induced Oligomerization of Frataxin and the Role of the Ferroxidation Reaction in Oligomerization Computational design of a symmetric homodimer using -strand assembly Janus: Prediction and Ranking of Mutations Required for Functional Interconversion of Enzymes The Crystal Structure of TAL Effector PthXo1 Bound to Its DNA Target Rational HIV Immunogen Design to Target Specific Germline B Cell Receptors Structure and flexibility of nanoscale protein cages designed by symmetric self-assembly.Structure of the basal components of a bacterial transporter Computational Design of a Protein-Based Enzyme Inhibitor Increasing Sequence Diversity with Flexible Backbone Protein Design: The Complete Redesign of a Protein Hydrophobic Core Optimization of affinity, specificity and function of designed influenza inhibitors using deep sequencing Mechanism of ubiquitin ligation and lysine prioritization by a HECT E3 The Designability of Protein Switches by Chemical Rescue of Structure: Mechanisms of Inactivation and Reactivation Proof of principle for epitope-focused vaccine design Design of activated serine–containing catalytic triads with atomic-level accuracy Accurate design of co-assembling multi-component protein nanomaterials A Mechanism for the Auto-inhibition of Hyperpolarization-activated Cyclic Nucleotide-gated (HCN) Channel Opening and Its Relief by cAMP

P2860

Q21134356-8564E7C7-A22A-4655-A444-F8EFBCFA4D22 Q21145748-60484F34-63DF-462B-8D42-1B5E3A114A19 Q24337002-3B726C6D-7606-443F-ADC4-950AC91D4B6C Q24610334-AD76001D-18C9-4F74-862E-180A68583FA0 Q24616003-AB230A16-6A26-4BBF-900C-53275CD8A43E Q24633467-617B6101-725D-414A-A4E7-12D2E30B65FB Q26738358-D98F9D2B-EF35-4D34-ABE5-02B6D4ACF67D Q26749162-8B314964-B74C-42EB-8E2B-6CBC77077F32 Q26767097-39551A1C-97FE-4612-8491-414F91BDD0CF Q26771275-A1A6B8A9-2616-41C7-8214-2F9D4BB8C7F0 Q26824545-EFD378C8-55A6-480E-B8A6-C4D16B6C7A0C Q26828848-32F0FB5F-7B09-4EDB-91FB-C655ED49FBF1 Q26851419-43D4DE11-2992-4678-A3BC-2F5F16A8282E Q27001110-CFF1219A-AC1D-41F5-9B83-B4917AF17E8C Q27312673-79B4D190-18D0-4561-AF5C-C2A1EC312930 Q27312694-98C37BD0-0740-4C29-80A7-6B30C68DFDD1 Q27318261-670F72F6-BD2A-4B26-8B5B-73F82B03D152 Q27322813-84A0DCD0-24AB-437D-8793-75719B8BA2FA Q27333188-4031EF7C-9996-4C2B-9161-7F27EC5104E6 Q27670812-AE71117C-E901-43FE-81A8-5197FBEEFF9F Q27671312-BCEDBC9B-1879-4F68-B681-0994967BFA06 Q27671901-7F4A9CC4-18D2-461B-9B6A-94EAD42657F8 Q27675367-A7F56150-0783-452D-92B6-3A3FBF50B284 Q27675879-EB7F8BAC-BD9A-4A67-AEB2-0CA18219D276 Q27675978-BBF7A4E2-F6CD-460D-A53A-7BE0A3596552 Q27675994-76309834-626F-4E4E-B8DA-A8FD03228623 Q27676283-011BA381-A064-471D-8376-687D58903245 Q27676609-C7D57EAB-E426-453E-8ECD-AB4F228EE00A Q27677104-8127AA38-9337-4B21-8BA8-7001DFBFB6FF Q27677724-98F51D8D-1D32-4051-9CD8-A2816F6A1D2D Q27678103-D80A1B0E-24C5-416E-B6C6-B65D520DB594 Q27678929-9D8F0B86-8F67-4CC8-ADF5-1CAF83E93877 Q27679301-A5D80452-5371-4CCA-938B-1D413F5E9D37 Q27679309-3CD87D72-9458-41A8-9611-FC98BA08B57B Q27679532-375DCCFE-1DEB-4467-8054-863E0842A61A Q27680801-34DF75E6-0B11-43A1-BFC1-9C16C75B418F Q27681593-E486A1DD-19B4-4CDD-9BEB-B2C76159723A Q27682981-98BFDB9A-B4D7-4B0D-AA9D-B8AB782AEAB1 Q27683974-9964B4B3-F1E8-42E4-B7EF-19847A7A0213 Q27684011-03FE3D73-5BD6-4C86-AE86-8198EDFB775F

P2860

ROSETTA3: an object-oriented software suite for the simulation and design of macromolecules

http://www.wikidata.org/entity/Q28914720

description

2011 nî lūn-bûn

@nan

2011 թուականին հրատարակուած գիտական յօդուած

@hyw

2011 թվականին հրատարակված գիտական հոդված

@hy

2011年の論文

@ja

2011年論文

@yue

2011年論文

@zh-hant

2011年論文

@zh-hk

2011年論文

@zh-mo

2011年論文

@zh-tw

2011年论文

@wuu

name

ROSETTA3: an object-oriented s ...... n and design of macromolecules

@ast

ROSETTA3: an object-oriented s ...... n and design of macromolecules

@en

type

label

ROSETTA3: an object-oriented s ...... n and design of macromolecules

@ast

ROSETTA3: an object-oriented s ...... n and design of macromolecules

@en

prefLabel

ROSETTA3: an object-oriented s ...... n and design of macromolecules

@ast

ROSETTA3: an object-oriented s ...... n and design of macromolecules

@en

P1433

Q28914720-4632A6DD-3C87-40DE-9B4A-FE63CFC386E5

P1476

Q28914720-1AA04BC5-072D-43B0-8852-A656362BE492

P2093

Q28914720-045AD520-02E6-427F-9B8C-67A90DB982C9

Q28914720-0E60D40A-CD70-401F-8B50-7193135929F1

Q28914720-115146C7-D11F-40DE-914B-424466B46196

Q28914720-1A68E9D3-C0D3-4F03-8AFD-4817664DFF65

Q28914720-1C3CA5E5-602E-4508-BF6D-A8AD8CD96B42

Q28914720-265F7A44-FC28-4450-A3B3-B8A37A2E5FA6

Q28914720-2CBF6C07-8327-4B4B-B1A9-0045BB4512FE

Q28914720-3C2E3826-99E4-4E11-A1EC-7D8C3EFFFEAB

Q28914720-47B96819-783D-442B-9BFE-7F055DCCB1D9

Q28914720-5298E233-0AA9-4E00-97C1-7B88CA43DEBF

P2860

Q28914720-0060F8A5-7874-4E34-B6BF-51897836D007

Q28914720-03AC36C0-C284-445F-9413-DAE284C84096

Q28914720-0FD32AD5-DEDB-4261-AAB6-E0F527C40CC5

Q28914720-10BAD051-8DF4-4D0E-8100-F6BA3F6FE9A7

Q28914720-22A3BD2B-E280-4083-9C55-14819DE8A4D5

Q28914720-23ED6134-0C69-4809-AF45-AEC1DF8DF100

Q28914720-2B919D4D-F01C-418B-8883-5E0A54D2D6AD

Q28914720-2C8A6AD7-B097-40D2-A05F-7D25D5785FCD

Q28914720-32033DB4-E1FF-4FE0-9F19-BE340D1DE97B

Q28914720-336BFB17-653A-4EF0-A728-E7AF59B8F157

P304

Q28914720-8AFDEF24-5282-43E7-975D-9849D87CFB86

P31

Q28914720-1AA2F85D-2BE7-4605-9AC2-69C4629AD5D8

P3181

Q28914720-EB8FC516-86CE-4E37-8F4D-E677476BEA82

P356

Q28914720-C7ED542C-E6A8-4116-B56F-AACE6C2DC251

P407

Q28914720-66A3F88A-5BE4-4A48-9183-FC8A7E874081

P478

Q28914720-6AF1515D-9AB6-4440-BB64-23C6AFB7BBDA

P50

Q28914720-00A2F970-A2B5-4A83-AA51-11946DB41ECD

Q28914720-36550075-62E1-4C47-86E9-712E5991CA57

Q28914720-41F55D68-D639-4A51-A646-2525C9BF6428

Q28914720-44AD0032-3CCD-42F0-B0F0-A28E4EAF1FAF

Q28914720-45DE370D-36BF-48D8-BCE8-7AAE4662DA98

Q28914720-97B98BF8-B297-48A2-897E-D4266464C8C0

Q28914720-B366EAB3-034F-489C-87AB-5D7D235B10E4

Q28914720-E4E6602E-4BE8-4317-AAA1-E76A31F5C997

Q28914720-ED868C61-BA9B-414A-8295-77BD6E396D56

P577

Q28914720-EC7F5139-59FB-4A1D-A1E7-18899EE3FCCD

P698

Q28914720-2F56D2C3-9398-4689-B0B6-AD2708A5B184

P921

Q28914720-C30F8D1C-D858-4642-BEC2-5E8282F7FA56

P932

Q28914720-3E69B7C5-3FA8-451C-8856-69DA3113277E

P3181

P356

B978-0-12-381270-4.00019-6

P1433

Methods in Enzymology

P1476

ROSETTA3: an object-oriented s ...... n and design of macromolecules

@en

P2093

Adrien Treuille

http://www.w3.org/2001/XMLSchema#string

Colin A Smith

http://www.w3.org/2001/XMLSchema#string

Daniel J Mandell

http://www.w3.org/2001/XMLSchema#string

David Baker

http://www.w3.org/2001/XMLSchema#string

David E Kim

http://www.w3.org/2001/XMLSchema#string

Florian Richter

http://www.w3.org/2001/XMLSchema#string

Ian W Davis

http://www.w3.org/2001/XMLSchema#string

James J Havranek

http://www.w3.org/2001/XMLSchema#string

James Thompson

http://www.w3.org/2001/XMLSchema#string

John Karanicolas

http://www.w3.org/2001/XMLSchema#string

P2860

Predicting protein structures with a multiplayer online game

De novo computational design of retro-aldol enzymes

Improved side-chain modeling for protein-protein docking

Native protein sequences are close to optimal for their structures

CHARMM: the biomolecular simulation program

Automated de novo prediction of native-like RNA tertiary structures

Kemp elimination catalysts by computational enzyme design

Protein-protein docking with simultaneous optimization of rigid-body displacement and side-chain conformations

Rosetta in CASP4: progress in ab initio protein structure prediction

Structure prediction for CASP7 targets using extensive all-atom refinement with Rosetta@home

P304

545-74

http://www.w3.org/2001/XMLSchema#string

P31

scholarly article

P3181

1333346

http://www.w3.org/2001/XMLSchema#string

P356

10.1016/B978-0-12-381270-4.00019-6

http://www.w3.org/2001/XMLSchema#string

P407

P478

487

http://www.w3.org/2001/XMLSchema#string

P50

Jeffrey J. Gray

Sarel J Fleishman

Andrew Leaver-Fay

P577

2011-01-01T00:00:00Z

http://www.w3.org/2001/XMLSchema#dateTime

P698

21187238

http://www.w3.org/2001/XMLSchema#string

P921

P932

4083816

http://www.w3.org/2001/XMLSchema#string