Rapid changes in gene expression dynamics in response to superoxide reveal SoxRS-dependent and independent transcriptional networks - Wikidata - awgldk - TriplyDB

Rapid changes in gene expression dynamics in response to superoxide reveal SoxRS-dependent and independent transcriptional networks

Rapid changes in gene expression dynamics in response to superoxide reveal SoxRS-dependent and independent transcriptional networks

http://www.wikidata.org/entity/Q28471595

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In vivo transcription kinetics of a synthetic gene uninvolved in stress-response pathways in stressed Escherichia coli cells Non-equilibrium hyperbolic transport in transcriptional regulation The PqrR transcriptional repressor of Pseudomonas aeruginosa transduces redox signals via an iron-containing prosthetic group.Statistical modelling of transcript profiles of differentially regulated genes.Integrating functional genomics data using maximum likelihood based simultaneous component analysis.MarA, SoxS and Rob of Escherichia coli - Global regulators of multidrug resistance, virulence and stress response.A systematic investigation of Escherichia coli central carbon metabolism in response to superoxide stress Transcriptome analysis of parallel-evolved Escherichia coli strains under ethanol stress.Interplay of cellular cAMP levels, {sigma}S activity and oxidative stress resistance in Escherichia coli.Genetic evidence for a novel interaction between transcriptional activator SoxS and region 4 of the σ(70) subunit of RNA polymerase at class II SoxS-dependent promoters in Escherichia coli Glucose-6-phosphate dehydrogenase protects Escherichia coli from tellurite-mediated oxidative stress Promoter discrimination at class I MarA regulon promoters mediated by glutamic acid 89 of the MarA transcriptional activator of Escherichia coli.Escherichia coli genes and pathways involved in surviving extreme exposure to ionizing radiation.Identification of self-consistent modulons from bacterial microarray expression data with the help of structured regulon gene sets.The sRNA SorY confers resistance during photooxidative stress by affecting a metabolite transporter in Rhodobacter sphaeroides The SoxRS response of Escherichia coli is directly activated by redox-cycling drugs rather than by superoxide Endogenous ROS levels in C. elegans under exogenous stress support revision of oxidative stress theory of life-history tradeoffs Integrated transcriptomic and proteomic analysis of the physiological response of Escherichia coli O157:H7 Sakai to steady-state conditions of cold and water activity stress SoxS increases the expression of the zinc uptake system ZnuACB in an Escherichia coli murine pyelonephritis model.Identification of a hypochlorite-specific transcription factor from Escherichia coli.State-selective metabolic labeling of cellular proteins Transcription Factors That Defend Bacteria Against Reactive Oxygen Species The E. coli SufS-SufE sulfur transfer system is more resistant to oxidative stress than IscS-IscU.YihE kinase is a central regulator of programmed cell death in bacteria Transcription activation by Escherichia coli Rob at class II promoters: protein-protein interactions between Rob's N-terminal domain and the σ(70) subunit of RNA polymerase Transcriptomic Analysis Reveals Adaptive Responses of an Enterobacteriaceae Strain LSJC7 to Arsenic Exposure.Analysis of yggX and gshA mutants provides insights into the labile iron pool in Salmonella enterica.Bioinformatics resources for the study of gene regulation in bacteria SoxRS-mediated lipopolysaccharide modification enhances resistance against multiple drugs in Escherichia coli.An integrated network approach identifies the isobutanol response network of Escherichia coli.Comparative study of SoxR activation by redox-active compounds Ectopic expression of a cyanobacterial flavodoxin in creeping bentgrass impacts plant development and confers broad abiotic stress tolerance.Iron-containing transcription factors and their roles as sensors.Fe-S proteins that regulate gene expression.The Campylobacter jejuni MarR-like transcriptional regulators RrpA and RrpB both influence bacterial responses to oxidative and aerobic stresses.Regulation Systems of Bacteria such as Escherichia coli in Response to Nutrient Limitation and Environmental Stresses.Direct oxidation of the [2Fe-2S] cluster in SoxR protein by superoxide: distinct differential sensitivity to superoxide-mediated signal transduction.Reduction of hydrogen peroxide stress derived from fatty acid beta-oxidation improves fatty acid utilization in Escherichia coli.Transcriptional responses of Escherichia coli K-12 and O157:H7 associated with lettuce leaves.Superoxide-mediated protection of Escherichia coli from antimicrobials.

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Rapid changes in gene expression dynamics in response to superoxide reveal SoxRS-dependent and independent transcriptional networks

http://www.wikidata.org/entity/Q28471595

description

2007 nî lūn-bûn

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2007 թուականի Նոյեմբերին հրատարակուած գիտական յօդուած

@hyw

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2007年の論文

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2007年論文

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2007年論文

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2007年论文

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Rapid changes in gene expressi ...... ndent transcriptional networks

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Rapid changes in gene expressi ...... ndent transcriptional networks

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Rapid changes in gene expressi ...... ndent transcriptional networks

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Rapid changes in gene expressi ...... ndent transcriptional networks

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Erin M Conlon

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Jeffrey L Blanchard

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Pablo J Pomposiello

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Wei-Yun Wholey

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Bioconductor: open software development for computational biology and bioinformatics

Escherichia coli K-12: a cooperatively developed annotation snapshot--2005

Construction of Escherichia coli K-12 in-frame, single-gene knockout mutants: the Keio collection

A small RNA regulates the expression of genes involved in iron metabolism in Escherichia coli

Hfq-dependent regulation of OmpA synthesis is mediated by an antisense RNA.

From genomics to chemical genomics: new developments in KEGG

GadY, a small-RNA regulator of acid response genes in Escherichia coli

MicC, a second small-RNA regulator of Omp protein expression in Escherichia coli

EcoCyc: a comprehensive database resource for Escherichia coli

RegulonDB (version 5.0): Escherichia coli K-12 transcriptional regulatory network, operon organization, and growth conditions

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