EcoCyc: a comprehensive database resource for Escherichia coli - Wikidata - awgldk - TriplyDB

EcoCyc: a comprehensive database resource for Escherichia coli

EcoCyc: a comprehensive database resource for Escherichia coli

http://www.wikidata.org/entity/Q24796847

about

Global functional atlas of Escherichia coli encompassing previously uncharacterized proteins Group II intron protein localization and insertion sites are affected by polyphosphate Large-scale mapping and validation of Escherichia coli transcriptional regulation from a compendium of expression profiles Escherichia coli K-12: a cooperatively developed annotation snapshot--2005 The partitioned Rhizobium etli genome: genetic and metabolic redundancy in seven interacting replicons sRNAPredict: an integrative computational approach to identify sRNAs in bacterial genomes.Expansion of the BioCyc collection of pathway/genome databases to 160 genomes.PUMA2--grid-based high-throughput analysis of genomes and metabolic pathways MetaCyc: a multiorganism database of metabolic pathways and enzymes A metabolic network in the evolutionary context: multiscale structure and modularity Sublethal antibiotic treatment leads to multidrug resistance via radical-induced mutagenesis The incoherent feed-forward loop can generate non-monotonic input functions for genes Diverse two-dimensional input functions control bacterial sugar genes Constraint-based analysis of metabolic capacity of Salmonella typhimurium during host-pathogen interaction STRING 8--a global view on proteins and their functional interactions in 630 organisms Systems biology of the structural proteome GO PaD: the Gene Ontology Partition Database Hfq modulates the sigmaE-mediated envelope stress response and the sigma32-mediated cytoplasmic stress response in Escherichia coli Identification of 17 Pseudomonas aeruginosa sRNAs and prediction of sRNA-encoding genes in 10 diverse pathogens using the bioinformatic tool sRNAPredict2 Genome annotation errors in pathway databases due to semantic ambiguity in partial EC numbers MODOMICS: a database of RNA modification pathways.The UCSC Archaeal Genome Browser.RegulonDB (version 5.0): Escherichia coli K-12 transcriptional regulatory network, operon organization, and growth conditions The comprehensive updated regulatory network of Escherichia coli K-12.NPInter: the noncoding RNAs and protein related biomacromolecules interaction database Structure and Function of the Escherichia coli Protein YmgB: A Protein Critical for Biofilm Formation and Acid-resistance kpath: integration of metabolic pathway linked data Text mining for metabolic pathways, signaling cascades, and protein networks Multicopy suppression underpins metabolic evolvability Minimum information requested in the annotation of biochemical models (MIRIAM)Rapid changes in gene expression dynamics in response to superoxide reveal SoxRS-dependent and independent transcriptional networks Combinatorial gene regulation using auto-regulation Functional states of the genome-scale Escherichia coli transcriptional regulatory system The Modular Organization of Protein Interactions in Escherichia coli Stability of metabolic correlations under changing environmental conditions in Escherichia coli--a systems approach Prediction of missing enzyme genes in a bacterial metabolic network. Reconstruction of the lysine-degradation pathway of Pseudomonas aeruginosa Quantifying the Determinants of Evolutionary Dynamics Leading to Drug Resistance Genome-Scale Mapping of Escherichia coli σ54 Reveals Widespread, Conserved Intragenic Binding Identification of enhanced hydrogen and ethanol Escherichia coli producer strains in a glycerol-based medium by screening in single-knock out mutant collections Electrostatic mis-interactions cause overexpression toxicity of proteins in E. coli

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EcoCyc: a comprehensive database resource for Escherichia coli

http://www.wikidata.org/entity/Q24796847

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2005 nî lūn-bûn

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2005 թուականի Յունուարին հրատարակուած գիտական յօդուած

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2005年の論文

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2005年論文

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2005年論文

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2005年論文

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2005年論文

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2005年論文

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2005年论文

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EcoCyc: a comprehensive database resource for Escherichia coli

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Nucleic Acids Research

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EcoCyc: a comprehensive database resource for Escherichia coli

@en

P2093

Ingrid M Keseler

http://www.w3.org/2001/XMLSchema#string

John Ingraham

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Socorro Gama-Castro

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Suzanne Paley

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P2860

The EcoCyc Database

A Bayesian method for identifying missing enzymes in predicted metabolic pathway databases

The complete genome sequence of Escherichia coli K-12

MetaCyc: a multiorganism database of metabolic pathways and enzymes.

An evidence ontology for use in pathway/genome databases.

RegulonDB (version 4.0): transcriptional regulation, operon organization and growth conditions in Escherichia coli K-12

Evaluation of computational metabolic-pathway predictions for Helicobacter pylori.

Using functional and organizational information to improve genome-wide computational prediction of transcription units on pathway-genome databases.

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D334-7

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scholarly article

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4175296

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10.1093/NAR/GKI108

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Database issue

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33

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Julio Collado-Vides

Martin Peralta-Gil

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2005-01-01T00:00:00Z

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8122274

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15608210

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Escherichia coli

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540062

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