about
MUSI: an integrated system for identifying multiple specificity from very large peptide or nucleic acid data setsFlyFactorSurvey: a database of Drosophila transcription factor binding specificities determined using the bacterial one-hybrid systemYeTFaSCo: a database of evaluated yeast transcription factor sequence specificitiesDry and wet approaches for genome-wide functional annotation of conventional and unconventional transcriptional activatorsUsing protein-binding microarrays to study transcription factor specificity: homologs, isoforms and complexesAffinity regression predicts the recognition code of nucleic acid–binding proteinsThe crystal structure of the Sox4 HMG domain-DNA complex suggests a mechanism for positional interdependence in DNA recognitionA promiscuous intermediate underlies the evolution of LEAFY DNA binding specificityMassively parallel measurements of molecular interaction kinetics on a microfluidic platform.Protein-DNA binding in high-resolutionInfluence of target concentration and background binding on in vitro selection of affinity reagentsDiffLogo: a comparative visualization of sequence motifsA comparative analysis of transcription factor binding models learned from PBM, HT-SELEX and ChIP data.Building accurate sequence-to-affinity models from high-throughput in vitro protein-DNA binding data using FeatureREDUCEA novel approach for transcription factor analysis using SELEX with high-throughput sequencing (TFAST).iSLIM: a comprehensive approach to mapping and characterizing gene regulatory networksA variant of LEAFY reveals its capacity to stimulate meristem development by inducing RAX1.Network component analysis provides quantitative insights on an Arabidopsis transcription factor-gene regulatory networkCreating PWMs of transcription factors using 3D structure-based computation of protein-DNA free binding energies.Evolution of reduced co-activator dependence led to target expansion of a starvation response pathway.FITBAR: a web tool for the robust prediction of prokaryotic regulons.SMARCAD1 Contributes to the Regulation of Naive Pluripotency by Interacting with Histone Citrullination.WSMD: weakly-supervised motif discovery in transcription factor ChIP-seq data.A modified bacterial one-hybrid system yields improved quantitative models of transcription factor specificityMultiplexed massively parallel SELEX for characterization of human transcription factor binding specificitiescoMOTIF: a mixture framework for identifying transcription factor and a coregulator motif in ChIP-seq data.Assessing the effects of symmetry on motif discovery and modeling.Advances in the study of protein-DNA interaction.Absence of a simple code: how transcription factors read the genomePrediction of regulatory interactions from genome sequences using a biophysical model for the Arabidopsis LEAFY transcription factor.Decoding ChIP-seq with a double-binding signal refines binding peaks to single-nucleotides and predicts cooperative interaction.Massively parallel in vivo enhancer assay reveals that highly local features determine the cis-regulatory function of ChIP-seq peaks.System size reduction in stochastic simulations of the facilitated diffusion mechanism.Guiding the design of synthetic DNA-binding molecules with massively parallel sequencing.Structure-based modeling of protein: DNA specificity.High-resolution specificity from DNA sequencing highlights alternative modes of Lac repressor binding.Novel modeling of combinatorial miRNA targeting identifies SNP with potential role in bone densityFinding the target sites of RNA-binding proteins.Maximally efficient modeling of DNA sequence motifs at all levels of complexity.Experimental strategies for studying transcription factor-DNA binding specificities.
P2860
Q24607812-7211AC63-1461-4CC6-9708-148AECA60DD7Q24609505-539F173F-14CF-48CD-9599-3062F0028AFAQ24623237-86E0661B-025B-4D81-94CB-7CDBC7A5B6DAQ26741875-3FBCADF3-FAFF-4FE6-8A61-A8D40EA38F45Q27024947-41C4417A-D43D-4A88-A8BA-7C3CD190116DQ27313925-682A2758-7819-4CCB-AC4B-D15112A09F29Q27676310-FFB0946C-3829-43C0-8F85-D035A49CA43FQ27688926-1530A2EF-8CE8-4C05-99AB-8743986128C0Q27938491-97650748-074F-40BB-8DEE-F66052B8F494Q28084330-73B2C15B-7D37-4D44-9B45-40C6F873C944Q28482831-C6DFFFE5-7E32-4008-BB0C-4EB7014A40DBQ30315961-06CAE091-A122-44AE-AA53-2B8082442CAEQ30749786-5BC667C6-093F-46FF-97EC-AD8D7A03EFA8Q31033869-6EE90568-085D-4C5B-88E4-A27121E891FCQ31089638-93FC7656-632D-4A18-8C38-D73C6C4618D8Q31109504-A0ACCB8E-70A6-4DD0-B131-D3F51D0EA189Q33355389-AF89DBF7-6A69-45BE-9C46-54202B9E3518Q33357039-131CA272-53FE-407B-9E97-2D68459A4F6BQ33570980-7B712492-E219-4269-80DD-A0B368528DE2Q33732357-835525CC-ED31-41D2-AE26-DC79BB131F9FQ33744456-09968278-82CB-47FB-ABAB-DFE860CA0173Q33785287-EADA4183-4062-4022-9C19-540AA15EF6EEQ33789914-96661BE0-9EBA-4E83-B12B-B9BEEC4CF441Q33878190-EDFB2442-5DF6-4B39-8F78-780B3B8705A1Q33881396-7F1EF123-3DD6-41EC-84A6-5724EF26D2E3Q33966726-5ECA8F8A-4831-4464-A4DA-B569740DA670Q34031585-1909195D-CAD2-4DEE-96CD-B714153BE586Q34032975-27EB1CF1-0D30-4CDE-9378-8D9A8804C4E2Q34111752-0DE107D6-5ED4-4E2F-96B7-F4D6C2EB7E83Q34180199-F9DDD1B9-2BBB-44D4-BCD1-475AD69E5A3FQ34350059-DC13EEA4-477D-409B-8E5B-FA29D0440ED8Q34354921-0604B997-AB7F-4C3F-92B6-694B18F6DF21Q34408678-269265DD-2AA7-4E70-A10C-CDCA89E16150Q34421960-4735C6DE-B23B-4515-BAC4-66A6497FF790Q34448872-75B05311-413F-4820-A25D-D07BC40BAB5FQ34471637-3D2EEE79-E67B-44EB-9B1A-CD192A884980Q34531156-D9916015-A480-4B18-B8B2-2958E260B258Q34617638-22BEF50A-A793-4068-911A-D4DFF2DDE585Q34760521-AF271949-2317-4F54-9F35-1D2098134ABEQ34832146-6BE1A5ED-CEFD-48C4-AD6D-24BDD874A806
P2860
description
2009 nî lūn-bûn
@nan
2009 թուականի Դեկտեմբերին հրատարակուած գիտական յօդուած
@hyw
2009 թվականի դեկտեմբերին հրատարակված գիտական հոդված
@hy
2009年の論文
@ja
2009年論文
@yue
2009年論文
@zh-hant
2009年論文
@zh-hk
2009年論文
@zh-mo
2009年論文
@zh-tw
2009年论文
@wuu
name
Inferring binding energies from selected binding sites
@ast
Inferring binding energies from selected binding sites
@en
Inferring binding energies from selected binding sites
@nl
type
label
Inferring binding energies from selected binding sites
@ast
Inferring binding energies from selected binding sites
@en
Inferring binding energies from selected binding sites
@nl
prefLabel
Inferring binding energies from selected binding sites
@ast
Inferring binding energies from selected binding sites
@en
Inferring binding energies from selected binding sites
@nl
P2093
P2860
P3181
P1476
Inferring binding energies from selected binding sites
@en
P2093
David Granas
Gary D Stormo
P2860
P304
P3181
P356
10.1371/JOURNAL.PCBI.1000590
P407
P577
2009-12-01T00:00:00Z