Activation of gene expression by a novel DNA structural transmission mechanism that requires supercoiling-induced DNA duplex destabilization in an upstream activating sequence.
about
Exact method for numerically analyzing a model of local denaturation in superhelically stressed DNAGenomic transcriptional response to loss of chromosomal supercoiling in Escherichia coliSusceptibility to superhelically driven DNA duplex destabilization: a highly conserved property of yeast replication originsSIDDBASE: a database containing the stress-induced DNA duplex destabilization (SIDD) profiles of complete microbial genomes.Mechanics of the IL2RA gene activation revealed by modeling and atomic force microscopyThe fitness landscapes of cis-acting binding sites in different promoter and environmental contextsCooperative DnaA Binding to the Negatively Supercoiled datA Locus Stimulates DnaA-ATP Hydrolysis.Promoter prediction and annotation of microbial genomes based on DNA sequence and structural responses to superhelical stress.Superhelical destabilization in regulatory regions of stress response genes.The interplay of StyR and IHF regulates substrate-dependent induction and carbon catabolite repression of styrene catabolism genes in Pseudomonas fluorescens ST.Theoretical analysis of the stress induced B-Z transition in superhelical DNA.Superhelical duplex destabilization and the recombination position effect.Escherichia coli and Salmonella 2000: the view from here.Repression of aerobic leukotoxin transcription by integration host factor in Aggregatibacter actinomycetemcomitansMonte Carlo simulations of locally melted supercoiled DNAs in 20 mM ionic strength.Theoretical analysis of competing conformational transitions in superhelical DNA.CysB Negatively Affects the Transcription of pqsR and Pseudomonas Quinolone Signal Production in Pseudomonas aeruginosaPressure dissociation of integration host factor-DNA complexes reveals flexibility-dependent structural variation at the protein-DNA interface.Mapping the phase diagram of the writhe of DNA nanocircles using atomistic molecular dynamics simulationsTranscriptional coupling between the divergent promoters of a prototypic LysR-type regulatory system, the ilvYC operon of Escherichia coli.Hierarchical mechanisms build the DNA-binding specificity of FUSE binding protein.Regulation of gene expression by PrrA in Rhodobacter sphaeroides 2.4.1: role of polyamines and DNA topology.Competitive superhelical transitions involving cruciform extrusionStress-induced DNA duplex destabilization (SIDD) in the E. coli genome: SIDD sites are closely associated with promoters.Characterization of integration host factor (IHF) binding upstream of the cysteine-rich protein operon (omcAB) promoter of Chlamydia trachomatis LGV serovar L2.Regulation of virulence in Brucella: an eclectic repertoire of transcription factors defines the complex architecture of the virB promoter.The integration host factor (IHF) integrates stationary-phase and virulence gene expression in Salmonella enterica serovar Typhimurium.ihfA gene of the bacterium Myxococcus xanthus and its role in activation of carotenoid genes by blue light.In vivo and in vitro effects of integration host factor at the DmpR-regulated sigma(54)-dependent Po promoter.The positive and negative regulation of Tn10 transposition by IHF is mediated by structurally asymmetric transposon arms.Expression of different bacterial cytotoxins is controlled by two global transcription factors, CRP and Fis, that co-operate in a shared-recruitment mechanism.Inhibition of DNA supercoiling-dependent transcriptional activation by a distant B-DNA to Z-DNA transition.Global gene expression profiling in Escherichia coli K12. The effects of integration host factor.Indirect recognition in sequence-specific DNA binding by Escherichia coli integration host factor: the role of DNA deformation energy.Effect of copy number and mRNA processing and stabilization on transcript and protein levels from an engineered dual-gene operon.Brownian dynamics simulations of sequence-dependent duplex denaturation in dynamically superhelical DNA.Activation and repression of transcription initiation by a distant DNA structural transition.Chromosomal organization of transcription: in a nutshell.Molecular cloning and transcriptional regulation of ompT, a ToxR-repressed gene in Vibrio cholerae.IHF-dependent activation of P1 plasmid origin by dnaA.
P2860
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P2860
Activation of gene expression by a novel DNA structural transmission mechanism that requires supercoiling-induced DNA duplex destabilization in an upstream activating sequence.
description
1998 nî lūn-bûn
@nan
1998 թուականի Օգոստոսին հրատարակուած գիտական յօդուած
@hyw
1998 թվականի օգոստոսին հրատարակված գիտական հոդված
@hy
1998年の論文
@ja
1998年学术文章
@wuu
1998年学术文章
@zh-cn
1998年学术文章
@zh-hans
1998年学术文章
@zh-my
1998年学术文章
@zh-sg
1998年學術文章
@yue
name
Activation of Gene Expression ...... n Upstream Activating Sequence
@de
Activation of Gene Expression ...... n Upstream Activating Sequence
@nl
Activation of gene expression ...... upstream activating sequence.
@ast
Activation of gene expression ...... upstream activating sequence.
@en
type
label
Activation of Gene Expression ...... n Upstream Activating Sequence
@de
Activation of Gene Expression ...... n Upstream Activating Sequence
@nl
Activation of gene expression ...... upstream activating sequence.
@ast
Activation of gene expression ...... upstream activating sequence.
@en
prefLabel
Activation of Gene Expression ...... n Upstream Activating Sequence
@de
Activation of Gene Expression ...... n Upstream Activating Sequence
@nl
Activation of gene expression ...... upstream activating sequence.
@ast
Activation of gene expression ...... upstream activating sequence.
@en
P2093
P2860
P356
P1476
Activation of gene expression ...... upstream activating sequence.
@en
P2093
Hatfield GW
Sheridan SD
P2860
P304
21298-21308
P356
10.1074/JBC.273.33.21298
P407
P577
1998-08-01T00:00:00Z