Serverification of molecular modeling applications: the Rosetta Online Server that Includes Everyone (ROSIE) - Wikidata - awgldk - TriplyDB

Serverification of molecular modeling applications: the Rosetta Online Server that Includes Everyone (ROSIE)

Serverification of molecular modeling applications: the Rosetta Online Server that Includes Everyone (ROSIE)

http://www.wikidata.org/entity/Q28914729

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From Mollusks to Medicine: A Venomics Approach for the Discovery and Characterization of Therapeutics from Terebridae Peptide Toxins Structural Analysis of Replication Protein A Recruitment of the DNA Damage Response Protein SMARCAL1 Crystal structure of the mouse interleukin-3 β-receptor: insights into interleukin-3 binding and receptor activation Binding interface between the Salmonella σ(S)/RpoS subunit of RNA polymerase and Crl: hints from bacterial species lacking crl Molecular insights into lipid-assisted Ca(2+) regulation of the TRP channel Polycystin-2 Intradimer/Intermolecular interactions suggest autoinhibition mechanism in endophilin A1 Computing structure-based lipid accessibility of membrane proteins with mp_lipid_acc in RosettaMP.Atomic-accuracy prediction of protein loop structures through an RNA-inspired Ansatz.Ultra-High-Throughput Structure-Based Virtual Screening for Small-Molecule Inhibitors of Protein-Protein Interactions.HIV-1 Recruits UPF1 but Excludes UPF2 to Promote Nucleocytoplasmic Export of the Genomic RNA.Angiotensin II type 1/adenosine A 2A receptor oligomers: a novel target for tardive dyskinesia.Structure guided homology model based design and engineering of mouse antibodies for humanization.Alternative computational protocols for supercharging protein surfaces for reversible unfolding and retention of stability The RosettaCon 2012 Special Collection: Code Writ on Water, Documentation Writ in Stone.Rational design of topographical helix mimics as potent inhibitors of protein-protein interactions.Structural basis for the recognition in an idiotype-anti-idiotype antibody complex related to celiac disease.Structural features of a 3' splice site in influenza a Combinatorial and Computational Approaches to Identify Interactions of Macrophage Colony-stimulating Factor (M-CSF) and Its Receptor c-FMS.The PTEN Tumor Suppressor Forms Homodimers in Solution.Investigation into the Mode of Phosphate Activation in the 4-Hydroxy-4-Methyl-2-Oxoglutarate/4-Carboxy-4-Hydroxy-2-Oxoadipate Aldolase from Pseudomonas putida F1.Mechanistic Insight into Bunyavirus-Induced Membrane Fusion from Structure-Function Analyses of the Hantavirus Envelope Glycoprotein Gc.Small Molecule-Based Pattern Recognition To Classify RNA Structure.The U4 Antibody Epitope on Human Papillomavirus 16 Identified by Cryo-electron Microscopy A Macrocyclic Peptide Ligand Binds the Oncogenic MicroRNA-21 Precursor and Suppresses Dicer Processing.Characterization and Structural Insights into Selective E1-E2 Interactions in the Human and Plasmodium falciparum SUMO Conjugation Systems Structures and Energetics of Four Adjacent G·U Pairs That Stabilize an RNA Helix.Identification of an activation site in Bak and mitochondrial Bax triggered by antibodies.Isolation of potent neutralizing antibodies from a survivor of the 2014 Ebola virus outbreak Clonidine inhibits anti-non-Gal IgM xenoantibody elicited in multiple pig-to-primate models.Structures of Ebola virus GP and sGP in complex with therapeutic antibodies.Protocols for Molecular Modeling with Rosetta3 and RosettaScripts Biochemical Methods To Investigate lncRNA and the Influence of lncRNA:Protein Complexes on Chromatin InteractiveROSETTA: a graphical user interface for the PyRosetta protein modeling suite.ALS mutant SOD1 interacts with G3BP1 and affects stress granule dynamics Humanization of high-affinity antibodies targeting glypican-3 in hepatocellular carcinoma Synergistic Neutralization of Pertussis Toxin by a Bispecific Antibody In Vitro and In Vivo Functional screening for anti-CMV biologics identifies a broadly neutralizing epitope of an essential envelope protein A novel chimeric lysin with robust antibacterial activity against planktonic and biofilm methicillin-resistant Staphylococcus aureus.Anti-metastatic effect of the TM4SF5-specific peptide vaccine and humanized monoclonal antibody on colon cancer in a mouse lung metastasis model.Elucidating molecular motion through structural and dynamic filters of energy-minimized conformer ensembles

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P2860

Serverification of molecular modeling applications: the Rosetta Online Server that Includes Everyone (ROSIE)

http://www.wikidata.org/entity/Q28914729

description

2013 nî lūn-bûn

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2013 թուականին հրատարակուած գիտական յօդուած

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2013 թվականին հրատարակված գիտական հոդված

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2013年の論文

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2013年論文

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2013年論文

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2013年論文

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2013年論文

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2013年論文

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2013年论文

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JOURNAL.PONE.0063906

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Serverification of molecular m ...... that Includes Everyone (ROSIE)

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Benjamin Borgo

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Bryan S Der

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Fang-Chieh Chou

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James J Havranek

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Jianqing Xu

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Kevin Drew

http://www.w3.org/2001/XMLSchema#string

P Douglas Renfrew

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Parin Sripakdeevong

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Sergey Lyskov

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Shane Ó Conchúir

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P2860

Toward high-resolution homology modeling of antibody Fv regions and application to antibody-antigen docking

A class of human proteins that deliver functional proteins into mammalian cells in vitro and in vivo

Increased Diels-Alderase activity through backbone remodeling guided by Foldit players.

The RosettaDock server for local protein-protein docking

Automated de novo prediction of native-like RNA tertiary structures

RosettaDesign server for protein design

Adding diverse noncanonical backbones to rosetta: enabling peptidomimetic design

Real-time PyMOL visualization for Rosetta and PyRosetta

A Correspondence Between Solution-State Dynamics of an Individual Protein and the Sequence and Conformational Diversity of its Family

Antibody modeling assessment

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Jeffrey J. Gray

Brian D Weitzner

Richard Bonneau

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2013-01-01T00:00:00Z

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236959592

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1302.0029

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3661552

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