BOMP: a program to predict integral beta-barrel outer membrane proteins encoded within genomes of Gram-negative bacteria. - Wikidata - awgldk - TriplyDB

BOMP: a program to predict integral beta-barrel outer membrane proteins encoded within genomes of Gram-negative bacteria.

BOMP: a program to predict integral beta-barrel outer membrane proteins encoded within genomes of Gram-negative bacteria.

http://www.wikidata.org/entity/Q30163990

about

CoBaltDB: Complete bacterial and archaeal orfeomes subcellular localization database and associated resources OMPdb: a database of {beta}-barrel outer membrane proteins from Gram-negative bacteria ClubSub-P: Cluster-Based Subcellular Localization Prediction for Gram-Negative Bacteria and Archaea Genome reduction in Leptospira borgpetersenii reflects limited transmission potential Membrane protein prediction methods Evaluation of methods for predicting the topology of beta-barrel outer membrane proteins and a consensus prediction method TMB-Hunt: an amino acid composition based method to screen proteomes for beta-barrel transmembrane proteins TMB-Hunt: a web server to screen sequence sets for transmembrane beta-barrel proteins.Prediction of beta-barrel membrane proteins by searching for restricted domains.Characterizing the Syphilis-Causing Treponema pallidum ssp. pallidum Proteome Using Complementary Mass Spectrometry Discovery of Novel Leptospirosis Vaccine Candidates Using Reverse and Structural Vaccinology.Comparative Genomic Analysis Reveals Habitat-Specific Genes and Regulatory Hubs within the Genus Novosphingobium Predicting Beta Barrel Transmembrane Proteins Using HMMs.PRED-TMBB2: improved topology prediction and detection of beta-barrel outer membrane proteins.Consensus computational network analysis for identifying candidate outer membrane proteins from Borrelia spirochetes.The composition of the global and feature specific cyanobacterial core-genomes.A novel Mitosomal β-barrel Outer Membrane Protein in Entamoeba Structural modeling and physicochemical characterization provide evidence that P66 forms a β-barrel in the Borrelia burgdorferi outer membrane.A 3-dimensional trimeric β-barrel model for Chlamydia MOMP contains conserved and novel elements of Gram-negative bacterial porins Is the C-terminal insertional signal in Gram-negative bacterial outer membrane proteins species-specific or not?Predicting the outer membrane proteome of Pasteurella multocida based on consensus prediction enhanced by results integration and manual confirmation Characterization of Esterase A, a Pseudomonas stutzeri A15 Autotransporter.BOCTOPUS: improved topology prediction of transmembrane β barrel proteins.Identification and localization of Myxococcus xanthus porins and lipoproteins In vivo versus in vitro protein abundance analysis of Shigella dysenteriae type 1 reveals changes in the expression of proteins involved in virulence, stress and energy metabolism.Improved identification of outer membrane beta barrel proteins using primary sequence, predicted secondary structure, and evolutionary information.Surface immunolabeling and consensus computational framework to identify candidate rare outer membrane proteins of Treponema pallidum.A highly accurate statistical approach for the prediction of transmembrane beta-barrels.Evolution of outer membrane beta-barrels from an ancestral beta beta hairpin.HHomp--prediction and classification of outer membrane proteins.Protein secretion and outer membrane assembly in Alphaproteobacteria In silico and microarray-based genomic approaches to identifying potential vaccine candidates against Leptospira interrogans.TMBETA-GENOME: database for annotated beta-barrel membrane proteins in genomic sequences.Computational Approaches for Revealing the Structure of Membrane Transporters: Case Study on Bilitranslocase.Discrimination of outer membrane proteins with improved performance.Comprehensive in silico prediction and analysis of chlamydial outer membrane proteins reflects evolution and life style of the Chlamydiae Elucidation of the outer membrane proteome of Salmonella enterica serovar Typhimurium utilising a lipid-based protein immobilization technique.Genome-Wide Analyses Reveal Genes Subject to Positive Selection in Pasteurella multocida Outer membrane proteins can be simply identified using secondary structure element alignment.Outer Membrane Proteome of Veillonella parvula: A Diderm Firmicute of the Human Microbiome

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P2860

BOMP: a program to predict integral beta-barrel outer membrane proteins encoded within genomes of Gram-negative bacteria.

http://www.wikidata.org/entity/Q30163990

description

2004 nî lūn-bûn

@nan

2004 թուականի Յուլիսին հրատարակուած գիտական յօդուած

@hyw

2004 թվականի հուլիսին հրատարակված գիտական հոդված

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2004年の論文

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2004年論文

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2004年論文

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2004年論文

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2004年論文

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2004年論文

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2004年论文

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name

BOMP: a program to predict int ...... mes of Gram-negative bacteria.

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BOMP: a program to predict int ...... mes of Gram-negative bacteria.

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BOMP: a program to predict int ...... mes of Gram-negative bacteria.

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BOMP: a program to predict int ...... mes of Gram-negative bacteria.

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BOMP: a program to predict int ...... mes of Gram-negative bacteria.

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BOMP: a program to predict int ...... mes of Gram-negative bacteria.

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Nucleic Acids Research

P1476

BOMP: a program to predict int ...... mes of Gram-negative bacteria.

@en

P2093

Frode S Berven

http://www.w3.org/2001/XMLSchema#string

Harald B Jensen

http://www.w3.org/2001/XMLSchema#string

Ingvar Eidhammer

http://www.w3.org/2001/XMLSchema#string

Kristian Flikka

http://www.w3.org/2001/XMLSchema#string

P2860

PSORT-B: Improving protein subcellular localization prediction for Gram-negative bacteria

Crystal structure and functional characterization of OmpK36, the osmoporin of Klebsiella pneumoniae

Structural evidence for dimerization-regulated activation of an integral membrane phospholipase

The structure of the outer membrane protein OmpX from Escherichia coli reveals possible mechanisms of virulence

Crystal structure of the bacterial membrane protein TolC central to multidrug efflux and protein export

Crystal structure of Omp32, the anion-selective porin from Comamonas acidovorans, in complex with a periplasmic peptide at 2.1 A resolution

Structure of porin refined at 1.8 A resolution

Crystal structures explain functional properties of two E. coli porins

Refined structure of the porin from Rhodopseudomonas blastica. Comparison with the porin from Rhodobacter capsulatus

The structure of OmpF porin in a tetragonal crystal form

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W394-9

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scholarly article

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10.1093/NAR/GKH351

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Web Server issue

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32

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2004-07-01T00:00:00Z

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8493672

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15215418

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P921

Gram-negative bacteria

P932

441489

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