An algorithm for constraint-based structural template matching: application to 3D templates with statistical analysis.
about
Discovery of a dipeptide epimerase enzymatic function guided by homology modeling and virtual screeningPDBSite: a database of the 3D structure of protein functional sitesProFunc: a server for predicting protein function from 3D structure.SiteEngines: recognition and comparison of binding sites and protein-protein interfacesIdentification of promiscuous ene-reductase activity by mining structural databases using active site constellationsBeauty is in the eye of the beholder: proteins can recognize binding sites of homologous proteins in more than one wayStructural annotation of Mycobacterium tuberculosis proteomeRational Structure-Based Rescaffolding Approach to De Novo Design of Interleukin 10 (IL-10) Receptor-1 MimeticsThe Catalytic Site Atlas: a resource of catalytic sites and residues identified in enzymes using structural dataAn aggregate analysis of many predicted structures to reduce errors in protein structure comparison caused by conformational flexibilityRecent advances in functional region prediction by using structural and evolutionary information - Remaining problems and future extensionsFrom sequence to enzyme mechanism using multi-label machine learning.Robust recognition of zinc binding sites in proteins.Prediction of enzyme function based on 3D templates of evolutionarily important amino acids.Detecting evolutionary relationships across existing fold space, using sequence order-independent profile-profile alignments.Towards comprehensive structural motif mining for better fold annotation in the "twilight zone" of sequence dissimilarity.Structural relationships among proteins with different global topologies and their implications for function annotation strategiesAnalysis of substructural variation in families of enzymatic proteins with applications to protein function prediction.Fingerprint Kernels for Protein Structure Comparison.1,000 structures and more from the MCSG.Discriminative structural approaches for enzyme active-site prediction.The Catalytic Site Atlas 2.0: cataloging catalytic sites and residues identified in enzymes.PocketAnnotate: towards site-based function annotation.Defining and searching for structural motifs using DeepView/Swiss-PdbViewer.Protein structure based prediction of catalytic residuesCatalytic site identification--a web server to identify catalytic site structural matches throughout PDB.Fast dynamics perturbation analysis for prediction of protein functional sites.De-orphaning the structural proteome through reciprocal comparison of evolutionarily important structural featuresThe rough guide to in silico function prediction, or how to use sequence and structure information to predict protein function.PocketMatch: a new algorithm to compare binding sites in protein structures.Annotation of protein residues based on a literature analysis: cross-validation against UniProtKb.CMASA: an accurate algorithm for detecting local protein structural similarity and its application to enzyme catalytic site annotation.VASP: a volumetric analysis of surface properties yields insights into protein-ligand binding specificity.Evolutionary trace annotation of protein function in the structural proteome.The LabelHash algorithm for substructure matching.Six Rossmannoid folds, including the Class I aminoacyl-tRNA synthetases, share a partial core with the anti-codon-binding domain of a Class II aminoacyl-tRNA synthetase.PESDserv: a server for high-throughput comparison of protein binding site surfaces.Cutoff Scanning Matrix (CSM): structural classification and function prediction by protein inter-residue distance patternsMetric learning for enzyme active-site search.Protein surface matching by combining local and global geometric information.
P2860
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P2860
An algorithm for constraint-based structural template matching: application to 3D templates with statistical analysis.
description
2003 nî lūn-bûn
@nan
2003 թուականի Սեպտեմբերին հրատարակուած գիտական յօդուած
@hyw
2003 թվականի սեպտեմբերին հրատարակված գիտական հոդված
@hy
2003年の論文
@ja
2003年論文
@yue
2003年論文
@zh-hant
2003年論文
@zh-hk
2003年論文
@zh-mo
2003年論文
@zh-tw
2003年论文
@wuu
name
An algorithm for constraint-ba ...... tes with statistical analysis.
@ast
An algorithm for constraint-ba ...... tes with statistical analysis.
@en
type
label
An algorithm for constraint-ba ...... tes with statistical analysis.
@ast
An algorithm for constraint-ba ...... tes with statistical analysis.
@en
prefLabel
An algorithm for constraint-ba ...... tes with statistical analysis.
@ast
An algorithm for constraint-ba ...... tes with statistical analysis.
@en
P356
P1433
P1476
An algorithm for constraint-ba ...... tes with statistical analysis.
@en
P2093
Jonathan A Barker
P304
P356
10.1093/BIOINFORMATICS/BTG226
P407
P577
2003-09-01T00:00:00Z