REMO: A new protocol to refine full atomic protein models from C-alpha traces by optimizing hydrogen-bonding networks
about
I-TASSER: a unified platform for automated protein structure and function prediction3.3 A cryo-EM structure of a nonenveloped virus reveals a priming mechanism for cell entry.Improving the physical realism and structural accuracy of protein models by a two-step atomic-level energy minimizationGeneral overview on structure prediction of twilight-zone proteinsAtomic Model of CPV Reveals the Mechanism Used by This Single-Shelled Virus to Economically Carry Out Functions Conserved in Multishelled ReovirusesCryo-EM structure of the mature dengue virus at 3.5-Å resolutionValidated near-atomic resolution structure of bacteriophage epsilon15 derived from cryo-EM and modeling3.5Å cryoEM Structure of Hepatitis B Virus Core Assembled from Full-Length Core ProteinAutomated protein structure modeling in CASP9 by I-TASSER pipeline combined with QUARK-based ab initio folding and FG-MD-based structure refinementIntrinsic conformational plasticity of native EmrE provides a pathway for multidrug resistanceProtein folding and de novo protein design for biotechnological applicationsA structured loop modulates coupling between the substrate-binding and dimerization domains in the multidrug resistance transporter EmrE.A three dimensional visualisation approach to protein heavy-atom structure reconstructionPredicting protein backbone chemical shifts from Cα coordinates: extracting high resolution experimental observables from low resolution models.NMR data-driven structure determination using NMR-I-TASSER in the CASD-NMR experiment.Template-based protein structure prediction in CASP11 and retrospect of I-TASSER in the last decade.HAAD: A quick algorithm for accurate prediction of hydrogen atoms in protein structures.I-TASSER: fully automated protein structure prediction in CASP8Fast assessment of structural models of ion channels based on their predicted current-voltage characteristics.Assessment of template-based modeling of protein structure in CASP11.Molecular requirements for ethanol differential allosteric modulation of glycine receptors based on selective Gbetagamma modulation.Computational protein design and large-scale assessment by I-TASSER structure assembly simulationsPredicting residue-residue contacts using random forest models.A protocol for computer-based protein structure and function predictionMembrane protein native state discrimination by implicit membrane models.High-quality protein backbone reconstruction from alpha carbons using Gaussian mixture models.Interplay of I-TASSER and QUARK for template-based and ab initio protein structure prediction in CASP10.A novel side-chain orientation dependent potential derived from random-walk reference state for protein fold selection and structure prediction.Distance-dependent statistical potentials for discriminating thermophilic and mesophilic proteinsBSP-SLIM: a blind low-resolution ligand-protein docking approach using predicted protein structuresAn atomic model of brome mosaic virus using direct electron detection and real-space optimizationRole of E542 and E545 missense mutations of PIK3CA in breast cancer: a comparative computational approach.The basic property of Lys385 is important for potentiation of the human α1 glycine receptor by ethanol.A putative ATPase mediates RNA transcription and capping in a dsRNA virusPurification, biochemical characterization and structural modelling of alkali-stable β-1,4-xylan xylanohydrolase from Aspergillus fumigatus R1 isolated from soilStructure and location of the regulatory β subunits in the (αβγδ)4 phosphorylase kinase complex.Gating machinery of InsP3R channels revealed by electron cryomicroscopyEvoDesign: De novo protein design based on structural and evolutionary profiles.Atomic resolution cryo electron microscopy of macromolecular complexes.Accurate optimization of amino acid form factors for computing small-angle X-ray scattering intensity of atomistic protein structures.
P2860
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P2860
REMO: A new protocol to refine full atomic protein models from C-alpha traces by optimizing hydrogen-bonding networks
description
2009 nî lūn-bûn
@nan
2009 թուականի Օգոստոսին հրատարակուած գիտական յօդուած
@hyw
2009 թվականի օգոստոսին հրատարակված գիտական հոդված
@hy
2009年の論文
@ja
2009年論文
@yue
2009年論文
@zh-hant
2009年論文
@zh-hk
2009年論文
@zh-mo
2009年論文
@zh-tw
2009年论文
@wuu
name
REMO: A new protocol to refine ...... zing hydrogen-bonding networks
@ast
REMO: A new protocol to refine ...... zing hydrogen-bonding networks
@en
type
label
REMO: A new protocol to refine ...... zing hydrogen-bonding networks
@ast
REMO: A new protocol to refine ...... zing hydrogen-bonding networks
@en
prefLabel
REMO: A new protocol to refine ...... zing hydrogen-bonding networks
@ast
REMO: A new protocol to refine ...... zing hydrogen-bonding networks
@en
P2860
P356
P1433
P1476
REMO: A new protocol to refine ...... zing hydrogen-bonding networks
@en
P2093
P2860
P304
P356
10.1002/PROT.22380
P407
P577
2009-08-01T00:00:00Z