RING: networking interacting residues, evolutionary information and energetics in protein structures.
about
Structure and dynamics of molecular networks: a novel paradigm of drug discovery: a comprehensive reviewStructural analysis of trimeric phospholipase A2 neurotoxin from the Australian taipan snake venomBeta-strand interfaces of non-dimeric protein oligomers are characterized by scattered charged residue patternsPerturbation centrality and turbine: a novel centrality measure obtained using a versatile network dynamics toolSequenceCEROSENE: a computational method and web server to visualize spatial residue neighborhoods at the sequence levelGraphlet signature-based scoring method to estimate protein-ligand binding affinityxiNET: cross-link network maps with residue resolutionThe RING 2.0 web server for high quality residue interaction networksStructural Analysis of Der p 1-Antibody Complexes and Comparison with Complexes of Proteins or Peptides with Monoclonal AntibodiesThe construction of an amino acid network for understanding protein structure and function.NeEMO: a method using residue interaction networks to improve prediction of protein stability upon mutation.Energy exchange network of inter-residue interactions within a thermally fluctuating protein molecule: A computational study.Topological analysis and interactive visualization of biological networks and protein structures.The effect of edge definition of complex networks on protein structure identification.Structural dynamics flexibility informs function and evolution at a proteome scale.A nucleosomal approach to inferring causal relationships of histone modifications.Principal component analysis of binding energies for single-point mutants of hT2R16 bound to an agonist correlate with experimental mutant cell responsePANADA: protein association network annotation, determination and analysis.The Victor C++ library for protein representation and advanced manipulation.Molecular-docking study of malaria drug target enzyme transketolase in Plasmodium falciparum 3D7 portends the novel approach to its treatment.Evolutionary Conserved Positions Define Protein Conformational DiversityConformational diversity analysis reveals three functional mechanisms in proteins.Structural insights into conformational stability of both wild-type and mutant EZH2 receptorProtein-Protein Interface and Disease: Perspective from Biomolecular Networks.CDKN2A unclassified variants in familial malignant melanoma: combining functional and computational approaches for their assessment.Fosfomycin induced structural change in fosfomycin resistance kinases FomA: molecular dynamics and molecular docking studies.Small-world networks of residue interactions in the Abl kinase complexes with cancer drugs: topology of allosteric communication pathways can determine drug resistance effects.From link-prediction in brain connectomes and protein interactomes to the local-community-paradigm in complex networksEvaluating the effect of mutations and ligand binding on transthyretin homotetramer dynamics.Specificity rendering 'hot-spots' for aurora kinase inhibitor design: the role of non-covalent interactions and conformational transitions.NAPS: Network Analysis of Protein Structures.Cold Denaturation Unveiled: Molecular Mechanism of the Asymmetric Unfolding of Yeast FrataxinCompensatory role of double mutation N348I/M184V on nevirapine binding landscape: insight from molecular dynamics simulation.An integrated molecular dynamics, principal component analysis and residue interaction network approach reveals the impact of M184V mutation on HIV reverse transcriptase resistance to lamivudine.Computational analysis of prolyl hydroxylase domain-containing protein 2 (PHD2) mutations promoting polycythemia insurgence in humans.Visualization and analysis of non-covalent contacts using the Protein Contacts Atlas.The emergence of protein complexes: quaternary structure, dynamics and allostery. Colworth Medal Lecture.Genetic identification and molecular modeling characterization reveal a novel PROM1 mutation in Stargardt4-like macular dystrophy.The Binding Mechanism Between Inositol Phosphate (InsP) and the Jasmonate Receptor Complex: A Computational StudyLigand induced change of β2adrenergic receptor from active to inactive conformation and its implication for the closed/open state of the water channel: insight from molecular dynamics simulation, free energy calculation and Markov state model analys
P2860
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P2860
RING: networking interacting residues, evolutionary information and energetics in protein structures.
description
2011 nî lūn-bûn
@nan
2011 թուականի Ապրիլին հրատարակուած գիտական յօդուած
@hyw
2011 թվականի ապրիլին հրատարակված գիտական հոդված
@hy
2011年の論文
@ja
2011年論文
@yue
2011年論文
@zh-hant
2011年論文
@zh-hk
2011年論文
@zh-mo
2011年論文
@zh-tw
2011年论文
@wuu
name
RING: networking interacting r ...... rgetics in protein structures.
@ast
RING: networking interacting r ...... rgetics in protein structures.
@en
type
label
RING: networking interacting r ...... rgetics in protein structures.
@ast
RING: networking interacting r ...... rgetics in protein structures.
@en
prefLabel
RING: networking interacting r ...... rgetics in protein structures.
@ast
RING: networking interacting r ...... rgetics in protein structures.
@en
P2093
P2860
P50
P356
P1433
P1476
RING: networking interacting r ...... ergetics in protein structures
@en
P2093
Filippo Boscariol
Michele Vidotto
P2860
P304
P356
10.1093/BIOINFORMATICS/BTR191
P407
P577
2011-04-14T00:00:00Z