about
Ultrafast and memory-efficient alignment of short DNA sequences to the human genomeMinimus: a fast, lightweight genome assemblerThe Genome Sequence of Trypanosoma cruzi, Etiologic Agent of Chagas DiseaseDraft genome of the filarial nematode parasite Brugia malayiComplete genome sequence and comparative analysis of the metabolically versatile Pseudomonas putida KT2440Evolution of genes and genomes on the Drosophila phylogenyThe genome of the protist parasite Entamoeba histolyticaThe genome sequence of Bacillus anthracis Ames and comparison to closely related bacteriaGenome sequence and comparative analysis of the model rodent malaria parasite Plasmodium yoelii yoeliiA framework for human microbiome researchGene prediction with Glimmer for metagenomic sequences augmented by classification and clusteringStructure, function and diversity of the healthy human microbiomeBacillus anthracis comparative genome analysis in support of the Amerithrax investigationMetagenomic analysis of the human distal gut microbiomeSerendipitous discovery of Wolbachia genomes in multiple Drosophila speciesCharacterization of Ehp, a secreted complement inhibitory protein from Staphylococcus aureusComparative genome sequencing for discovery of novel polymorphisms in Bacillus anthracisMicrobiota that affect risk for shigellosis in children in low-income countriesDiarrhea in young children from low-income countries leads to large-scale alterations in intestinal microbiota compositionSurvey of culture, goldengate assay, universal biosensor assay, and 16S rRNA Gene sequencing as alternative methods of bacterial pathogen detectionQuantitative PCR for detection of Shigella improves ascertainment of Shigella burden in children with moderate-to-severe diarrhea in low-income countriesGenome assembly forensics: finding the elusive mis-assembly.Figaro: a novel statistical method for vector sequence removalStatistical methods for detecting differentially abundant features in clinical metagenomic samples.Assembly complexity of prokaryotic genomes using short reads.Alignment and clustering of phylogenetic markers--implications for microbial diversity studies.Finishing genomes with limited resources: lessons from an ensemble of microbial genomes.Differential abundance analysis for microbial marker-gene surveys.Automated ensemble assembly and validation of microbial genomes.MetAMOS: a modular and open source metagenomic assembly and analysis pipeline.Genomic characterization of the Yersinia genusAssessing the benefits of using mate-pairs to resolve repeats in de novo short-read prokaryotic assemblies.MetaPath: identifying differentially abundant metabolic pathways in metagenomic datasets.Scaffolding of long read assemblies using long range contact information.DNACLUST: accurate and efficient clustering of phylogenetic marker genes.Accurate and fast estimation of taxonomic profiles from metagenomic shotgun sequences.Next generation sequence assembly with AMOS.Exploiting sparseness in de novo genome assemblyDeep sequencing of the oral microbiome reveals signatures of periodontal disease.Hierarchical scaffolding with Bambus.
P50
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P50
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P1053
A-7987-2013
P106
P1153
7005781142
P21
P2456
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P4012
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