Assembly complexity of prokaryotic genomes using short reads.
about
A practical comparison of de novo genome assembly software tools for next-generation sequencing technologiesEvaluation of short read metagenomic assemblyHybrid error correction and de novo assembly of single-molecule sequencing readsThe advantages of SMRT sequencingGraph-based clustering and characterization of repetitive sequences in next-generation sequencing data.Semi-automatic in silico gap closure enabled de novo assembly of two Dehalobacter genomes from metagenomic dataComputational solutions for omics data.Read length and repeat resolution: exploring prokaryote genomes using next-generation sequencing technologies.Value of a newly sequenced bacterial genomeReducing assembly complexity of microbial genomes with single-molecule sequencingUsing genomic sequencing for classical genetics in E. coli K12.Assessing the benefits of using mate-pairs to resolve repeats in de novo short-read prokaryotic assemblies.A hybrid approach for the automated finishing of bacterial genomesWhole-genome comparison of two Campylobacter jejuni isolates of the same sequence type reveals multiple loci of different ancestral lineage.A new strategy for better genome assembly from very short reads.Evolutionary dynamics of complete Campylobacter pan-genomes and the bacterial species conceptCharacterization of the core and accessory genomes of Pseudomonas aeruginosa using bioinformatic tools Spine and AGEntPerformance comparison of benchtop high-throughput sequencing platforms.AGORA: Assembly Guided by Optical Restriction AlignmentConservation of gene cassettes among diverse viruses of the human gut.Index-free de novo assembly and deconvolution of mixed mitochondrial genomes.SplitMEM: a graphical algorithm for pan-genome analysis with suffix skips.De novo likelihood-based measures for comparing genome assemblies.The complete genome sequence of Escherichia coli EC958: a high quality reference sequence for the globally disseminated multidrug resistant E. coli O25b:H4-ST131 clone.Comparative whole-genome analysis of clinical isolates reveals characteristic architecture of Mycobacterium tuberculosis pangenome.Signature gene expression reveals novel clues to the molecular mechanisms of dimorphic transition in Penicillium marneffei.Bambus 2: scaffolding metagenomes.Extensive Mobilome-Driven Genome Diversification in Mouse Gut-Associated Bacteroides vulgatus mpkSeqEntropy: genome-wide assessment of repeats for short read sequencingDe novo assembly of short sequence reads.Exploring genome characteristics and sequence quality without a reference.Draft Genome Sequence of Mycobacterium ulcerans S4018 Isolated from a Patient with an Active Buruli Ulcer in Benin, Africa.Snowball: strain aware gene assembly of metagenomes.Classifying multigraph models of secondary RNA structure using graph-theoretic descriptors.Returning to more finished genomes.Comparative genome analysis of Lactobacillus casei strains isolated from Actimel and Yakult products reveals marked similarities and points to a common origin.Space-efficient and exact de Bruijn graph representation based on a Bloom filter.Updating benchtop sequencing performance comparison.Metagenomic assembly through the lens of validation: recent advances in assessing and improving the quality of genomes assembled from metagenomes.On using optical maps for genome assembly.
P2860
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P2860
Assembly complexity of prokaryotic genomes using short reads.
description
2010 nî lūn-bûn
@nan
2010 թուականի Յունուարին հրատարակուած գիտական յօդուած
@hyw
2010 թվականի հունվարին հրատարակված գիտական հոդված
@hy
2010年の論文
@ja
2010年論文
@yue
2010年論文
@zh-hant
2010年論文
@zh-hk
2010年論文
@zh-mo
2010年論文
@zh-tw
2010年论文
@wuu
name
Assembly complexity of prokaryotic genomes using short reads.
@ast
Assembly complexity of prokaryotic genomes using short reads.
@en
Assembly complexity of prokaryotic genomes using short reads.
@nl
type
label
Assembly complexity of prokaryotic genomes using short reads.
@ast
Assembly complexity of prokaryotic genomes using short reads.
@en
Assembly complexity of prokaryotic genomes using short reads.
@nl
prefLabel
Assembly complexity of prokaryotic genomes using short reads.
@ast
Assembly complexity of prokaryotic genomes using short reads.
@en
Assembly complexity of prokaryotic genomes using short reads.
@nl
P2860
P356
P1433
P1476
Assembly complexity of prokaryotic genomes using short reads.
@en
P2093
Carl Kingsford
P2860
P2888
P356
10.1186/1471-2105-11-21
P577
2010-01-12T00:00:00Z
P5875
P6179
1040509079