Qualimap: evaluating next-generation sequencing alignment data. - Wikidata - awgldk - TriplyDB

Qualimap: evaluating next-generation sequencing alignment data.

Qualimap: evaluating next-generation sequencing alignment data.

http://www.wikidata.org/entity/Q30558763

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Extensive expression differences along porcine small intestine evidenced by transcriptome sequencing Differences in muscle transcriptome among pigs phenotypically extreme for fatty acid composition A survey of best practices for RNA-seq data analysis Genomic insights into the evolutionary origin of Myxozoa within Cnidaria Evolution of Variable Number Tandem Repeats and Its Relationship with Genomic Diversity in Salmonella Typhimurium A genetic strategy for probing the functional diversity of magnetosome formation Reconstruction of the Metabolic Potential of Acidophilic Sideroxydans Strains from the Metagenome of an Microaerophilic Enrichment Culture of Acidophilic Iron-Oxidizing Bacteria from a Pilot Plant for the Treatment of Acid Mine Drainage Reveals Meta A whole mitochondria analysis of the Tyrolean Iceman's leather provides insights into the animal sources of Copper Age clothing Genome Analysis of the Biotechnologically Relevant Acidophilic Iron Oxidising Strain JA12 Indicates Phylogenetic and Metabolic Diversity within the Novel Genus "Ferrovum"Basidioascus undulatus: genome, origins, and sexuality Mosquito genomics. Extensive introgression in a malaria vector species complex revealed by phylogenomics Species and gene divergence in Littorina snails detected by array comparative genomic hybridization Genome Sequence of the Acetogenic Bacterium Acetobacterium wieringae DSM 1911T First Insights into the Genome Sequence of the Halophilic Archaeon Halalkalicoccus paucihalophilus (DSM 24557)Gene discovery by chemical mutagenesis and whole-genome sequencing in Dictyostelium.Whole genome sequencing of one complex pedigree illustrates challenges with genomic medicine Reducing INDEL calling errors in whole genome and exome sequencing data.PhyResSE: a Web Tool Delineating Mycobacterium tuberculosis Antibiotic Resistance and Lineage from Whole-Genome Sequencing Data.Soup to Tree: The Phylogeny of Beetles Inferred by Mitochondrial Metagenomics of a Bornean Rainforest Sample Data quality aware analysis of differential expression in RNA-seq with NOISeq R/Bioc package Qualimap 2: advanced multi-sample quality control for high-throughput sequencing data.dupRadar: a Bioconductor package for the assessment of PCR artifacts in RNA-Seq data.InFusion: Advancing Discovery of Fusion Genes and Chimeric Transcripts from Deep RNA-Sequencing Data.SPlinted Ligation Adapter Tagging (SPLAT), a novel library preparation method for whole genome bisulphite sequencing Identification of potential biomarkers in donor cows for in vitro embryo production by granulosa cell transcriptomics Silencing SMOC2 ameliorates kidney fibrosis by inhibiting fibroblast to myofibroblast transformation Radiogenomic Analysis of Oncological Data: A Technical Survey.Quality control on the frontier.Decoding human gene expression signatures in the brain Repeated divergent selection on pigmentation genes in a rapid finch radiation.Software for pre-processing Illumina next-generation sequencing short read sequences.The Draft Genome of the Non-Host-Associated Methanobrevibacter arboriphilus Strain DH1 Encodes a Large Repertoire of Adhesin-Like Proteins.Whole-Genome Sequence of the Metastatic PC3 and LNCaP Human Prostate Cancer Cell Lines.Comparison of variations detection between whole-genome amplification methods used in single-cell resequencing Slow growth of Mycobacterium tuberculosis at acidic pH is regulated by phoPR and host-associated carbon sources.Whole genome complete resequencing of Bacillus subtilis natto by combining long reads with high-quality short reads.Genome analysis of Campylobacter concisus strains from patients with inflammatory bowel disease and gastroenteritis provides new insights into pathogenicity.Comparative transcriptomics reveals striking similarities between the bovine and feline isolates of Tritrichomonas foetus: consequences for in silico drug-target identification.Transcription profile of soybean-root-knot nematode interaction reveals a key role of phythormones in the resistance reaction.Analysis of porcine adipose tissue transcriptome reveals differences in de novo fatty acid synthesis in pigs with divergent muscle fatty acid composition

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P2860

Qualimap: evaluating next-generation sequencing alignment data.

http://www.wikidata.org/entity/Q30558763

description

2012 nî lūn-bûn

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2012 թուականի Օգոստոսին հրատարակուած գիտական յօդուած

@hyw

2012 թվականի օգոստոսին հրատարակված գիտական հոդված

@hy

2012年の論文

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2012年論文

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2012年論文

@zh-hant

2012年論文

@zh-hk

2012年論文

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2012年論文

@zh-tw

2012年论文

@wuu

name

Qualimap: evaluating next-generation sequencing alignment data.

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Qualimap: evaluating next-generation sequencing alignment data.

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type

label

Qualimap: evaluating next-generation sequencing alignment data.

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Qualimap: evaluating next-generation sequencing alignment data.

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prefLabel

Qualimap: evaluating next-generation sequencing alignment data.

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Qualimap: evaluating next-generation sequencing alignment data.

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Qualimap: evaluating next-generation sequencing alignment data

@en

P2093

Fernando García-Alcalde

http://www.w3.org/2001/XMLSchema#string

Konstantin Okonechnikov

http://www.w3.org/2001/XMLSchema#string

Luis M Cruz

http://www.w3.org/2001/XMLSchema#string

P2860

Ultrafast and memory-efficient alignment of short DNA sequences to the human genome

TopHat: discovering splice junctions with RNA-Seq

RNA-seq: an assessment of technical reproducibility and comparison with gene expression arrays

Sequencing technologies - the next generation

The Sequence Alignment/Map format and SAMtools

How to map billions of short reads onto genomes

Repitools: an R package for the analysis of enrichment-based epigenomic data.

SAMStat: monitoring biases in next generation sequencing data.

RNA-SeQC: RNA-seq metrics for quality control and process optimization

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2678-2679

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scholarly article

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10.1093/BIOINFORMATICS/BTS503

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20

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28

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Thomas F. Meyer

Joaquín Dopazo

J Carbonell-Caballero

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2012-08-22T00:00:00Z

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230722081

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22914218

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